Protein Concepts Dictionary

Tableau information

Concept source:  d1eqne_  amino acid (a.a.) range (GLY247)(GLN401)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY247)  (ASN255) H1
	  (ASN259)  (GLU265) E2
	  (TYR267)  (GLY277) H3
	  (TYR280)  (GLY286) E4
	  (THR290)  (THR301) H5
	  (ASN303)  (ASP309) E6
	  (ARG312)  (ALA325) H7
	  (GLY332)  (LEU340) E8
	  (ASP345)  (GLY354) H9
	  (GLU356)  (GLN364) H10
	  (PRO367)  (VAL380) H11
	  (THR384)  (GLN401) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2      164.9°   E2                                                                           
H3       26.5°  138.4°   H3                                                                    
E4     -160.2°  -34.9° -172.5°   E4                                                             
H5        9.6°  156.5°  -19.2°  165.8°   H5                                                      
E6      143.4°  -22.4°  117.9°  -56.2°  137.0°   E6                                               
H7      -63.5°  131.3°  -89.3°   96.8°  -70.1°  152.8°   H7                                        
E8      123.6°  -41.4°   97.5°  -76.2°  116.5°  -20.8°  172.1°   E8                                 
H9       38.2°  127.0°   14.6° -161.3°  -32.7°  105.2° -101.7°   85.6°   H9                          
H10    -102.8°   89.0° -123.3°   63.8° -112.3°   98.7°  -63.0°  115.8°  122.6°   H10                  
H11     142.2°  -38.5°  133.5°  -45.8°  145.9°   38.9° -121.7°   55.7°  119.2°   60.3°   H11           
H12     -69.4°  114.7°  -78.2°  101.6°  -66.8°  126.9°   55.0°  122.3°  -91.7° -113.8°  147.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1eqnc_ :   (GLY247)  (ALA395)   [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
 d1eqna_ :   (GLY247)  (ALA395)   [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
 d1eqnb_ :   (GLY247)  (GLN401)   [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
 d1eqnd_ :   (GLY247)  (GLN401)   [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
 d1eqne_ :   (GLY247)  (GLN401)   [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
 d3b39b_ :   (GLY247)  (LEU394)   [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |automated matches |Escherichia coli K-12 [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  e.13