Protein Concepts Dictionary

Tableau information

Concept source:  d4e5oa_  amino acid (a.a.) range (ASP153)(GLY294)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHEEEHEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP153)  (THR164) H1
	  (ILE171)  (ALA175) E2
	  (ASN177)  (MET184) H3
	  (LEU192)  (VAL197) E4
	  (GLU201)  (TYR207) E5
	  (ARG209)  (ASP212) E6
	  (ASP212)  (THR235) H7
	  (ASP241)  (GLY247) E8
	  (GLY247)  (TYR252) E9
	  (ILE256)  (GLN262) H10
	  (LYS272)  (ARG277) E11
	  (ASP289)  (GLY294) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2     -168.0°   E2                                                                           
H3     -142.4°  -30.1°   H3                                                                    
E4      -18.4°  160.0°  130.0°   E4                                                             
E5      145.0°  -33.9°  -61.9°  163.4°   E5                                                      
E6     -121.8°   47.4°  -25.7° -116.0°   69.4°   E6                                               
H7      -51.9°  138.0°  127.3°  -41.4°  145.6°  135.4°   H7                                        
E8      138.5°  -41.2°  -69.4°  156.9°   -7.5°  -75.8°  142.3°   E8                                 
E9     -124.8°   44.5°  -22.8° -118.5°   67.5°   -3.0° -135.9°   74.1°   E9                          
H10     -26.4°  145.4°  116.2°  -18.5° -154.3°   98.6°   58.1° -152.4°  101.3°   H10                  
E11     -93.4°   96.7°   94.9°  -80.9°  111.6°  116.1°  -41.5°  112.8°  114.3°   94.1°   E11           
E12      76.3°  -92.1°  -83.3°   84.5°  -85.9°  -58.2°  125.9°  -86.1°  -60.8°   68.6°  159.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1i00a_ :   (ASP159)  (GLY300)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Human (Homo sapiens) [TaxId: 9606]
 d4e5oa_ :   (ASP153)  (GLY294)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1j3id_ :   (LYS464)  (HIS599)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d1ju6a_ :   (GLN160)  (GLY300)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Human (Homo sapiens) [TaxId: 9606]
 d2rdaa_ :   (GLN160)  (HIS304)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Human (Homo sapiens) [TaxId: 9606]
 d4e5oe_ :   (ASP153)  (HIS298)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1hzwa_ :   (GLN160)  (GLY300)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Human (Homo sapiens) [TaxId: 9606]
 d4einb_ :   (GLN154)  (HIS298)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3h9kd_ :   (GLN160)  (GLY300)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Human (Homo sapiens) [TaxId: 9606]
 d4geva_ :   (ILE112)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d4iqqd_ :   (GLN169)  (ASP302)   [view usage] : d.117.1.0 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d4h0rb_ :   (ARG123)  (GLY253)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Corynebacterium glutamicum [TaxId: 196627]
 d3dgac_ :   (LEU456)  (HIS599)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3dgad_ :   (LYS464)  (ASN595)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d1j3jc_ :   (LYS464)  (HIS599)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d4foaa_ :   (ARG120)  (ASN250)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3ijza_ :   (LEU164)  (ASN303)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d1j3ic_ :   (LYS464)  (HIS599)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3qj7a_ :   (ILE112)  (ASN250)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1aiqa_ :   (ILE112)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1ncea_ :   (ILE112)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d3gg5d_ :   (GLN160)  (GLY300)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.117