Protein Concepts Dictionary

Tableau information

Concept source:  d3dt2a1  amino acid (a.a.) range (GLN25)(MET173)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHEEEEHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN25)   (LEU37) H1
	   (GLU41)   (ILE45) E2
	   (SER49)   (GLY64) H3
	   (VAL65)   (LYS71) E4
	   (ASN74)   (THR80) E5
	   (THR92)   (GLN97) E6
	  (GLY114)  (SER118) E7
	  (SER118)  (ARG129) H8
	  (GLY132)  (ARG137) H9
	  (ARG137)  (GLY147) E10
	  (LEU153)  (ASP162) E11
	  (PRO164)  (MET173) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2      162.2°   E2                                                                           
H3       11.1° -151.2°   H3                                                                    
E4      116.7°   49.3° -106.5°   E4                                                             
E5       41.5° -137.6°   45.9°  137.3°   E5                                                      
E6      109.4°  -83.2°  118.3° -132.5°   75.2°   E6                                               
E7       76.2° -121.1°   87.3° -156.2°   65.9°  -46.6°   E7                                        
H8      -66.0°  116.4°   66.6°  -82.0°  105.5° -129.0°   86.1°   H8                                 
H9      -95.8°   82.0°   92.1°  -49.4°  137.3° -137.0° -112.2°   35.5°   H9                          
E10     145.1°  -22.3° -136.6°   56.7° -116.2°  -79.1° -124.6°  135.3°   99.9°   E10                  
E11     -26.7°  160.0°   33.5° -116.1°   62.0°  110.1°   65.8°   43.6°   78.1°  168.7°   E11           
H12     152.9°  -11.0° -142.7°   48.9° -128.4°  -84.3° -126.7° -123.7°  -88.4°   12.3° -164.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3dt7a1 :    (GLN25)  (MET173)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3moha1 :    (GLN25)  (MET173)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4wiea1 :    (GLN17)  (MET159)   [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 419947]
 d2rk8a1 :    (PRO24)  (MET173)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2qf2b1 :    (GLN25)  (MET173)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2qf1a1 :    (GLN25)  (MET173)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4ox2a1 :    (GLN25)  (THR174)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2qewa1 :    (GLN25)  (MET173)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1khba2 :    (GLN25)  (THR174)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Human (Homo sapiens) [TaxId: 9606]
 d2rk7a1 :    (PRO24)  (MET173)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3dt2a1 :    (GLN25)  (MET173)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.109