Tableau information
Concept source: d3u5cw_ amino acid (a.a.) range (SER5)(TYR130)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: HEHEEEEHEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER5) (GLY21) H1
(ARG23) (PRO29) E2
(SER31) (GLY45) H3
(GLY48) (ASP54) E4
(GLY59) (LEU65) E5
(LYS71) (PRO77) E6
(PRO77) (LYS82) E7
(LYS82) (ASN92) H8
(PHE99) (THR105) E9
(HIS113) (HIS120) H10
(HIS120) (LYS124) E11
(LEU126) (TYR130) E12
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 163.5° E2
H3 -38.5° 157.7° H3
E4 133.3° -34.6° -159.7° E4
E5 -32.7° 158.9° 15.8° 165.9° E5
E6 -160.7° 18.5° 143.5° -52.5° 140.6° E6
E7 101.6° -94.5° 63.2° -120.4° 71.5° 84.2° E7
H8 -27.2° 136.4° -64.8° 112.3° -55.2° 138.4° -126.7° H8
E9 157.4° -14.3° 158.1° -24.1° 169.6° -32.4° -98.4° 134.9° E9
H10 129.5° -67.0° 91.1° -92.3° 100.0° 59.9° -28.5° -155.2° 69.9° H10
E11 -96.0° 67.7° -132.3° 54.1° -118.9° -73.1° -153.8° 68.8° 69.3° 133.0° E11
E12 13.4° 175.7° -25.1° 145.1° -20.9° 159.9° 88.2° -40.0° 167.6° -116.1° -108.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xzmh_ : (ASN5) (TYR130) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1i6ub_ : (PRO6) (TYR130) [view usage] : d.140.1.1 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Methanococcus jannaschii [TaxId: 2190]
d3j38w_ : (ALA8) (PHE130) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d2zkqh1 : (VAL6) (PHE130) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Dog (Canis familiaris) [TaxId: 9615]
d3u5cw_ : (SER5) (TYR130) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
i.1, d.140