Protein Concepts Dictionary

Tableau information

Concept source:  d1rue1_  amino acid (a.a.) range (ASP66)(SER187)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEEHEHEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP66)   (LEU71) H1
	   (ARG73)   (HIS78) E2
	   (VAL79)   (LYS85) E3
	   (ASN92)   (LYS97) H4
	   (LEU98)  (ILE104) E5
	  (VAL110)  (THR120) H6
	  (THR120)  (PHE124) E7
	  (GLU127)  (ASP138) E8
	  (TYR142)  (PRO155) E9
	  (ASP165)  (PRO174) H10
	  (PRO174)  (LYS179) E11
	  (GLY181)  (SER187) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2       32.6°   E2                                                                           
E3      -35.4°   49.9°   E3                                                                    
H4      100.4° -123.8°  117.0°   H4                                                             
E5      155.8°  129.3° -161.8°  -79.3°   E5                                                      
H6     -151.1° -118.4°  138.7° -101.8°  -23.2°   H6                                               
E7      -82.9° -101.7°  -52.3°   96.5° -121.3°  112.6°   E7                                        
E8      -15.4°  -44.3°  -46.6°   85.2°  149.2° -158.4°  -86.6°   E8                                 
E9      129.2°   96.6°  123.6° -119.4°  -40.8°  -21.9° -119.1°  139.0°   E9                          
H10    -165.5°  158.6° -134.3°  -75.4°   38.1°   41.9°  -83.8° -157.1°   63.1°   H10                  
E11     -53.7°  -85.2°  -66.1°   51.5°  130.8°  152.9°   71.7°  -41.0°  168.2° -116.1°   E11           
E12     146.4°  115.1°  127.1° -111.4°  -34.7°  -12.1° -103.3°  159.2°  -21.1°   43.7°  159.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1rmu1_ :    (ASP66)  (SER187)   [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
 d2rmu1_ :    (ASP66)  (SER187)   [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
 d1rui1_ :    (ASP66)  (SER187)   [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
 d1rug1_ :    (ASP66)  (SER187)   [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
 d1rhi1_ :    (ASP66)  (SER187)   [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus 3, (HRV-3) [TaxId: 44130]
 d1rue1_ :    (ASP66)  (SER187)   [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
 d1ruc1_ :    (ASP66)  (SER187)   [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 b.121