Protein Concepts Dictionary

Tableau information

Concept source:  d4oryh_  amino acid (a.a.) range (GLN35)(GLY171)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN35)   (LEU40) H1
	   (GLY41)   (ALA46) E2
	   (ALA46)   (SER50) E3
	   (SER52)   (LEU62) H4
	   (ALA65)   (PRO71) E5
	   (LEU77)   (PHE83) E6
	   (CYS89)  (GLY100) E7
	  (TYR105)  (SER109) E8
	  (SER114)  (VAL120) E9
	  (LEU130)  (GLY135) E10
	  (ASP142)  (ARG151) E11
	  (ALA157)  (GLY171) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2       68.8°   E2                                                                           
E3     -116.0°  -62.6°   E3                                                                    
H4       45.7° -105.0° -161.6°   H4                                                             
E5     -147.9°  140.9°   82.0°  113.1°   E5                                                      
E6       20.6°  -48.4° -102.1°   61.0°  167.7°   E6                                               
E7      175.8°  108.6°   64.4° -134.0°  -35.7°  156.2°   E7                                        
E8      -52.6°  -66.6°  -70.8°   92.0°  118.8°  -53.4°  129.9°   E8                                 
E9       97.3°  104.8°  132.8°  -61.4°  -86.6°   98.5°  -80.1°  149.9°   E9                          
E10    -100.6°  -79.7°  -33.9°  135.1°   79.5°  -97.4°   81.9°  -48.0°  161.9°   E10                  
E11      69.0°  115.8°  171.9°  -24.6°  -96.8°   80.8° -110.1°  116.4°  -39.1°  153.9°   E11           
H12    -127.9°  -76.1°  -14.0°  169.5°   68.0° -115.7°   53.1°  -78.8°  128.7°  -34.5°  163.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4os3a_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4imoa_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4orwa_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4os3b_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4oryd_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4oryc_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4imna_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4os8b_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4oryh_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4oryf_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4os0a_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4orua_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2czub_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4oryg_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4os8a_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4orsb_ :    (GLN35)  (GLY171)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.60