Tableau information
Concept source: d1fmd3_ amino acid (a.a.) range (THR89)(LEU213)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: HEEEHEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR89) (THR99) H1
(THR99) (GLY103) E2
(ILE105) (PHE111) E3
(ASP116) (TYR125) E4
(ASN135) (ALA140) H5
(ILE143) (ASP148) E6
(SER153) (ALA164) E7
(ASP166) (ALA171) E8
(TRP183) (GLN188) E9
(ILE189) (LYS193) E10
(ASP197) (ALA203) E11
(PHE209) (LEU213) E12
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 128.9° E2
E3 -166.3° -63.6° E3
E4 13.2° -118.5° 165.1° E4
H5 51.3° -80.8° -142.4° 47.1° H5
E6 164.6° 62.0° -17.8° 177.1° -131.2° E6
E7 -19.7° -119.7° 155.2° 9.9° 55.1° -172.8° E7
E8 -102.1° 129.0° 65.6° 111.7° 146.1° -68.4° 108.2° E8
E9 173.0° 46.4° -17.2° 159.8° -126.1° -22.4° 153.7° -82.7° E9
E10 -146.7° 80.8° 28.3° -159.5° 139.4° 19.2° -159.1° -51.1° 40.2° E10
E11 28.6° 114.2° 159.8° -35.0° 34.7° 142.1° -44.7° -111.7° 153.5° 133.7° E11
E12 34.3° 161.5° -134.2° 46.2° 80.7° -132.7° 47.5° -68.6° -151.3° -113.5° -47.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mec3_ : (THR92) (MET221) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Mengo encephalomyocarditis virus coat proteins |Mengovirus [TaxId: 12107]
d2wzr3_ : (THR89) (MET214) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Foot-and-mouth disease virus [TaxId: 12122]
d1zba3_ : (THR89) (LEU214) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Foot-and-mouth disease virus [TaxId: 12110]
d2mev3_ : (THR92) (MET221) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Mengo encephalomyocarditis virus coat proteins |Mengovirus [TaxId: 12107]
d1fmd3_ : (THR89) (LEU213) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Aphthovirus (Foot-and-mouth disease virus) coat proteins |FMDV (Foot-and-mouth disease virus), strain bfs, 1860 [TaxId: 12110]
d2ws93_ : (THR88) (HIS218) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Equine rhinitis a virus [TaxId: 47000]
d4gh4c_ : (THR89) (LEU214) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Foot-and-mouth disease virus - type a [TaxId: 12111]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121