Protein Concepts Dictionary

Tableau information

Concept source:  d2p2zb_  amino acid (a.a.) range (GLU2)(LEU170)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHHHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU2)    (HIS8) E1
	   (LEU12)   (GLY17) H2
	   (THR28)   (LEU42) H3
	   (PRO46)   (SER50) E4
	   (LEU52)   (GLY63) H5
	   (ASP89)   (PHE99) H6
	  (SER109)  (VAL117) H7
	  (PHE118)  (MET124) H8
	  (ALA128)  (THR132) E9
	  (HIS133)  (GLY145) H10
	  (GLY153)  (ASP159) E11
	  (LEU165)  (LEU170) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2      -80.9°   H2                                                                           
H3      160.9°  107.5°   H3                                                                    
E4      -38.5°   61.0°  160.2°   E4                                                             
H5      114.3° -117.3°  -46.6°  151.7°   H5                                                      
H6     -150.9° -110.4°   10.0°  169.1°  -36.7°   H6                                               
H7      130.4° -137.8°  -34.1°  161.2°  -31.4°  -28.3°   H7                                        
H8      139.0° -129.4°  -24.7°  169.0°  -32.5°  -19.1°    9.4°   H8                                 
E9      -25.9°   60.6°  168.1°  -15.8°  136.1° -166.9°  156.2°  164.9°   E9                          
H10    -142.1°  -61.3°   48.3°  114.6°  -83.2°   54.6°  -82.3°  -72.8° -120.4°   H10                  
E11     162.6°   89.2°  -36.5°  124.0°  -83.0°   46.4°  -65.7°  -57.7°  137.4°   32.6°   E11           
E12     -24.7°  -93.8°  136.2°  -63.2°   89.7° -126.3°  107.9°  115.6°  -49.4° -146.1°  172.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2pa0b_ :     (MET1)  (ASP159)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2p79b_ :     (GLY9)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2p2zb_ :     (GLU2)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus [TaxId: 274]
 d2p9yb_ :     (MET1)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2p78b_ :     (GLY9)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2p6oa_ :     (GLU2)  (ASP171)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2p77b_ :     (MET1)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2ekzb_ :     (GLY9)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2p9fb_ :     (MET1)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus [TaxId: 274]
 d2enwb_ :     (GLY9)  (ASP159)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2p6ob_ :     (MET1)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2eoab_ :     (GLY9)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus [TaxId: 274]
 d2ekbb_ :     (MET1)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2owdb_ :     (MET1)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2ekba_ :     (GLU2)  (ASP171)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1v37b_ :     (GLY9)  (LEU170)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Alpha-ribazole-5'-phosphate phosphatase |Thermus thermophilus [TaxId: 274]
 d2p6mb_ :     (MET1)  (ASP159)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus [TaxId: 274]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.60