Tableau information
Concept source: d4f4ac_ amino acid (a.a.) range (GLU4)(TRP132)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: EHHEEHHEHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU4) (VAL10) E1
(PRO12) (ASN18) H2
(LEU19) (GLY31) H3
(GLY31) (VAL35) E4
(VAL35) (LEU39) E5
(THR43) (TYR51) H6
(PHE59) (SER69) H7
(GLY70) (GLY79) E8
(GLY81) (GLY91) H9
(THR102) (PHE107) H10
(CYS116) (SER121) E11
(SER121) (TRP132) H12
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -62.6° H2
H3 159.2° 102.1° H3
E4 -83.5° -109.7° -116.1° E4
E5 -18.8° -78.8° 175.2° 67.7° E5
H6 -132.2° 118.3° 40.3° 129.4° -135.1° H6
H7 83.3° 40.8° -93.7° -78.4° -90.1° 131.0° H7
E8 158.4° 100.3° -2.1° 116.1° -176.1° 42.1° -91.6° E8
H9 -27.2° 57.5° 133.3° -110.5° -43.3° -108.2° 92.4° 133.1° H9
H10 -10.0° 58.0° 149.5° -93.5° -28.0° -124.7° 84.6° 148.8° -17.5° H10
E11 154.5° -142.8° -41.7° 87.0° 138.0° 44.5° -117.9° -43.3° -148.0° -157.0° E11
H12 61.3° -67.8° -128.4° -42.0° 56.4° 166.3° -44.6° -126.9° 85.4° 68.9° 122.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ngsb_ : (GLU4) (TRP132) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Leishmania major [TaxId: 5664]
d3fkbd_ : (GLU9) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1nuea_ : (LEU4) (TRP133) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Human (Homo sapiens) [TaxId: 9606]
d4c6aa_ : (GLU9) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d4enoa_ : (THR7) (TRP133) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Human (Homo sapiens), NDKA [TaxId: 9606]
d1hlwa_ : (GLU9) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d3emta_ : (GLN2) (TRP131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d3enaa_ : (THR4) (TRP131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d2dyab_ : (THR10) (PHE139) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Pyrococcus horikoshii [TaxId: 53953]
d2az3c_ : (THR8) (PHE136) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Halobacterium salinarum [TaxId: 2242]
d1mn7a_ : (THR11) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1w7wa_ : (THR6) (LEU131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Pea (Pisum sativum) [TaxId: 3888]
d4uofa_ : (THR6) (TRP132) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Pacific white shrimp (Litopenaeus vannamei) [TaxId: 6689]
d1hhqa_ : (THR11) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d4kpca_ : (THR6) (TRP132) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Leishmania braziliensis [TaxId: 5660]
d3prva_ : (GLU4) (TRP132) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d3ejma_ : (LEU1) (TRP131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d2dxea_ : (GLU6) (PHE139) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Pyrococcus horikoshii [TaxId: 53953]
d4o0na_ : (GLU7) (TRP135) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Toxoplasma gondii [TaxId: 508771]
d4fkxa_ : (THR6) (PHE131) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
d2dxeb_ : (THR10) (PHE139) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Pyrococcus horikoshii [TaxId: 53953]
d3ngth_ : (ARG5) (TRP132) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Leishmania major [TaxId: 5664]
d4f4aa_ : (THR6) (PHE131) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
d3evwa_ : (ALA-1) (TRP127) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d1ehwa_ : (THR7) (TRP133) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Human (Homo sapiens), NDK4 [TaxId: 9606]
d2cwka1 : (GLU6) (PHE139) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Pyrococcus horikoshii [TaxId: 53953]
d1b4sa_ : (GLU9) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1bhna_ : (GLU5) (PHE134) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Cow (Bos taurus) [TaxId: 9913]
d1f6tb_ : (GLU9) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d2vu5a_ : (MET1) (PHE130) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3emtb_ : (THR4) (TRP131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d3ngsa_ : (GLU4) (TRP132) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Leishmania major [TaxId: 5664]
d3g2xa_ : (GLN2) (PHE132) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d4enob_ : (THR7) (PHE134) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Human (Homo sapiens), NDKA [TaxId: 9606]
d3fbfa_ : (THR4) (TRP127) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d3ngtg_ : (GLU4) (TRP132) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Leishmania major [TaxId: 5664]
d1k44a_ : (THR5) (TRP132) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Mycobacterium tuberculosis [TaxId: 1773]
d1nskl_ : (ASN3) (LEU132) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Human (Homo sapiens) [TaxId: 9606]
d1lwxa_ : (GLU9) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d3etma_ : (GLN2) (TRP131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d3em1a_ : (THR4) (TRP131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d3evoa_ : (LEU1) (TRP131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d2cwkb_ : (GLU6) (PHE139) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1wkja1 : (THR4) (PHE130) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Thermus thermophilus [TaxId: 274]
d3ddia_ : (THR4) (TRP131) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Acanthamoeba polyphaga mimivirus [TaxId: 212035]
d2dxda_ : (THR10) (PHE139) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Pyrococcus horikoshii [TaxId: 53953]
d1b99a_ : (THR11) (TRP137) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58