Protein Concepts Dictionary

Tableau information

Concept source:  d1aqna_  amino acid (a.a.) range (ALA1)(ALA152)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHHEEHEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA1)    (PRO5) E1
	    (TYR6)   (LYS12) H2
	   (PRO14)   (GLY20) H3
	   (VAL26)   (ASP32) E4
	   (ALA45)   (VAL51) E5
	   (HIS64)   (VAL72) H6
	   (GLY80)   (VAL84) E7
	   (SER89)   (LYS94) E8
	  (TYR104)  (ASN118) H9
	  (ASP120)  (PRO129) E10
	  (SER132)  (GLY146) H11
	  (VAL148)  (ALA152) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2       61.3°   H2                                                                           
H3      132.0°   80.3°   H3                                                                    
E4       73.6°  134.5° -140.7°   E4                                                             
E5       56.1°  116.4°  137.5°  -24.4°   E5                                                      
H6      -97.5°  -38.3°   59.0°  158.9°  153.6°   H6                                               
E7      -40.2°   27.3°   93.3°  112.2°   90.7°  -65.2°   E7                                        
E8       66.7°  127.0° -132.9°  -17.9°  -10.7°  164.1°  101.0°   E8                                 
H9     -112.8°  -53.2°   29.8°  170.5°  154.3°  -30.2°  -73.1°  156.9°   H9                          
E10      57.6°  116.5° -159.4°  -19.3°  -25.7°  141.6°   97.6°  -27.5° -169.6°   E10                  
H11    -115.1°  -53.8°   39.4° -168.2°  167.4°  -20.5°  -78.1°  171.5°   14.8° -160.7°   H11           
E12      81.6°  128.9° -146.1°  -30.2°  -51.5°  131.0°  120.5°  -47.8°  154.1°  -29.3° -139.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1s01a_ :     (ALA1)  (ALA152)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
 d1af4a_ :     (ALA1)  (ALA152)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus licheniformis [TaxId: 1402]
 d1gcia_ :     (ALA1)  (ALA152)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus lentus [TaxId: 1467]
 d1aqna_ :     (ALA1)  (ALA152)   [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.41