Protein Concepts Dictionary

Tableau information

Concept source:  d2flhc_  amino acid (a.a.) range (MET1)(TYR149)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)   (SER12) E1
	   (GLU16)   (LEU22) H2
	   (ASP25)   (LEU34) H3
	   (ASP40)   (GLU45) E4
	   (THR52)   (PHE58) E5
	   (SER65)   (GLU70) E6
	   (THR72)   (GLU76) E7
	   (HIS79)   (GLN84) E8
	   (GLY89)   (GLY94) H9
	   (SER96)  (GLU106) E10
	  (ASP110)  (ASP125) E11
	  (THR131)  (TYR149) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2      134.7°   H2                                                                           
H3       77.2°  -89.9°   H3                                                                    
E4     -122.8°   79.4°  159.2°   E4                                                             
E5       76.4°   81.2°  -13.8°  159.4°   E5                                                      
E6      -95.9° -111.1°  154.8°  -31.9°  167.2°   E6                                               
E7      -32.9° -153.8°  102.9°  -94.2°  106.3°  -64.2°   E7                                        
E8      138.9°   22.2°  -73.3°   91.3°  -68.1°  122.4° -171.2°   E8                                 
H9      139.2°  -64.1°   65.8°   93.5°  -71.7°  110.1°  142.1°  -44.0°   H9                          
E10     -32.4° -158.0°   99.4°  -97.0°  103.6°  -66.3°    4.6°  171.1°  137.9°   E10                  
E11     157.1°  -30.2°  -84.7°   77.1°  -82.6°  106.3°  170.0°  -18.5°  -35.8°  169.6°   E11           
H12     -24.1°  121.1°   96.2° -104.5°   91.5°  -84.9°  -35.7°  135.9°  161.9°  -38.4°  151.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2flhc_ :     (MET1)  (TYR149)   [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Mung bean (Vigna radiata) [TaxId: 157791]
 d1e09a_ :     (PHE3)  (HIS154)   [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |Major tree pollen allergen |Sweet cherry (Prunus avium), pru av 1 [TaxId: 42229]
 d3c0va_ :     (MET1)  (SER151)   [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Mung bean (Vigna radiata) [TaxId: 157791]
 d2flhd_ :     (VAL2)  (SER151)   [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Mung bean (Vigna radiata) [TaxId: 157791]
 d4q0ka_ :     (MET1)  (ASN154)   [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
 d2flhb_ :     (MET1)  (SER151)   [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Mung bean (Vigna radiata) [TaxId: 157791]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.129