Tableau information
Concept source: d3n4ja_ amino acid (a.a.) range (MET1)(GLY154)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET1) (PHE7) E1
(PRO13) (THR25) H2
(GLN28) (LYS33) E3
(ASP41) (ALA47) H4
(TYR51) (ILE57) H5
(ILE57) (HIS61) E6
(ASP62) (LYS71) H7
(ARG79) (LEU83) E8
(ASP100) (GLY105) E9
(ALA113) (LEU119) H10
(LYS124) (PRO128) E11
(LEU138) (GLY154) H12
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -170.6° H2
E3 -13.4° -157.5° E3
H4 114.1° -74.5° 127.4° H4
H5 -74.5° 96.5° -64.1° 137.7° H5
E6 -40.4° 130.3° -29.9° 140.3° -34.3° E6
H7 -164.1° -7.1° 150.7° -81.5° 91.8° 125.0° H7
E8 -45.6° 143.6° -58.9° 69.6° -113.9° -83.4° 150.3° E8
E9 -16.3° 173.2° -29.2° 99.4° -90.0° -56.4° 176.2° -29.9° E9
H10 -139.8° 36.6° 136.4° -72.6° 76.2° 108.1° -38.9° -130.8° -144.9° H10
E11 -92.3° 96.7° -105.7° 23.6° -143.4° -126.5° 103.5° -46.9° -76.8° -95.1° E11
H12 160.4° -13.0° 150.6° -76.4° 86.7° 121.0° -14.7° 145.3° 169.1° 24.3° 99.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3n4ja_ : (MET1) (GLY154) [view usage] : c.116.1.1 |alpha/beta knot |alpha/beta knot |SpoU-like RNA 2'-O ribose methyltransferase |automated matches |Yersinia pestis [TaxId: 214092]
d3n4ka_ : (LEU2) (GLY154) [view usage] : c.116.1.1 |alpha/beta knot |alpha/beta knot |SpoU-like RNA 2'-O ribose methyltransferase |automated matches |Yersinia pestis [TaxId: 214092]
d4kgnf_ : (PHE2) (GLY151) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 425067]
d4kgnc_ : (PHE2) (GLY151) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 425067]
d4jala_ : (LEU2) (GLY149) [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3n4kb_ : (MET1) (GLY154) [view usage] : c.116.1.1 |alpha/beta knot |alpha/beta knot |SpoU-like RNA 2'-O ribose methyltransferase |automated matches |Yersinia pestis [TaxId: 214092]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.116