Protein Concepts Dictionary

Tableau information

Concept source:  d4ohfb_  amino acid (a.a.) range (GLY277)(ALA448)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY277)  (GLY281) E1
	  (ALA284)  (GLY292) H2
	  (GLU297)  (ASP303) E3
	  (ASP308)  (ASN317) H4
	  (ARG319)  (GLU325) E5
	  (GLU326)  (ALA337) H6
	  (LEU338)  (ILE366) H7
	  (SER370)  (ASN403) H8
	  (SER417)  (ARG425) H9
	  (CYS428)  (GLU432) E10
	  (LEU434)  (HIS440) H11
	  (MET443)  (ALA448) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2      152.4°   H2                                                                           
E3      -62.5°  144.7°   E3                                                                    
H4      136.6°  -23.0°  154.1°   H4                                                             
E5      -83.6°  122.8°  -22.6°  138.1°   E5                                                      
H6       86.1°  -97.3°   74.4° -118.0°  -65.6°   H6                                               
H7       46.3° -111.7°   95.1° -110.8°  106.9°   62.6°   H7                                        
H8     -117.5°   77.4°  -86.4°   69.3°   82.5°  138.3° -157.7°   H8                                 
H9      129.9°  -29.1°  156.9°   -6.7° -143.8° -121.7° -107.0°   70.6°   H9                          
E10    -100.6°  106.9°  -38.1°  118.8°  -20.1°  -77.6°  126.8°   65.0°  124.1°   E10                  
H11     138.7°  -17.9°  149.9°  -33.2°  127.7°   84.9°  -94.5°   95.3°  -37.1°  116.6°   H11           
E12     -30.8° -140.6°   61.6° -144.3°   75.0°   55.5°   33.5° -141.9° -140.3°   95.1°  122.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ohfb_ :   (GLY277)  (ALA448)   [view usage] : c.108.1.23 |HAD-like |HAD-like |5' nucleotidase-like |Cytosolic IMP-GMP specific 5'-nucleotidase |Legionella pneumophila [TaxId: 272624]
 d4g63a_ :   (GLY277)  (ALA448)   [view usage] : c.108.1.23 |HAD-like |HAD-like |5' nucleotidase-like |Cytosolic IMP-GMP specific 5'-nucleotidase |Legionella pneumophila [TaxId: 272624]
 d2bdea1 :   (GLY277)  (ALA448)   [view usage] : c.108.1.23 |HAD-like |HAD-like |5' nucleotidase-like |Cytosolic IMP-GMP specific 5'-nucleotidase |Legionella pneumophila [TaxId: 446]
 d4ohfd_ :   (GLY277)  (ALA448)   [view usage] : c.108.1.23 |HAD-like |HAD-like |5' nucleotidase-like |Cytosolic IMP-GMP specific 5'-nucleotidase |Legionella pneumophila [TaxId: 272624]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108