Tableau information
Concept source: d1ssda_ amino acid (a.a.) range (PHE6)(VAL154)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE6) (TRP12) E1
(LYS19) (ALA31) H2
(GLU38) (PRO44) E3
(LEU48) (LYS54) H4
(LYS58) (GLN64) E5
(PRO80) (GLY87) H6
(ALA89) (GLY94) E7
(GLU97) (GLY103) H8
(SER105) (GLY120) H9
(GLY122) (GLY128) E10
(LEU131) (GLY137) H11
(ILE138) (VAL154) H12
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 163.5° H2
E3 -14.3° -176.2° E3
H4 133.9° -29.8° 147.1° H4
E5 -49.5° 146.1° -37.3° 172.9° E5
H6 104.7° -59.5° 117.2° -30.1° 154.2° H6
E7 -74.9° 114.8° -69.0° 133.2° -39.6° 146.1° E7
H8 35.5° -161.0° 21.8° 168.8° -16.8° 138.7° -54.5° H8
H9 113.6° -57.6° 118.6° -42.8° 144.1° -36.8° -171.1° 131.0° H9
E10 -78.7° 107.7° -75.9° 120.9° -52.1° 131.9° -14.3° -65.3° -163.7° E10
H11 -135.6° 55.8° 128.0° -82.4° 91.8° -111.6° 60.6° 108.5° -110.8° 58.2° H11
H12 95.0° -84.8° 92.3° -79.7° 106.9° -71.5° 142.3° 96.4° -37.8° 156.6° 120.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1su5a_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d3ypib_ : (PHE5) (GLU153) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4ff7a_ : (PHE5) (GLU152) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1aw1a_ : (PRO4) (ALA151) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Vibrio marinus [TaxId: 90736]
d2i9ea_ : (PHE5) (VAL153) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Yellow mealworm (Tenebrio molitor) [TaxId: 7067]
d1sw3a_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d1trea_ : (HIS5) (ALA151) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Escherichia coli [TaxId: 562]
d1ssda_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d1sw7a_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d1svda1 : (LEU163) (GLY315) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Halothiobacillus neapolitanus [TaxId: 927]
d4bi6a_ : (PRO2) (GLY156) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Giardia intestinalis [TaxId: 5741]
d1tpwa_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d4bi5a_ : (PRO6) (LEU155) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Giardia intestinalis [TaxId: 5741]
d1b9ba_ : (ARG3) (TYR153) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Thermotoga maritima [TaxId: 2336]
d2i9eb_ : (PHE5) (VAL153) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Yellow mealworm (Tenebrio molitor) [TaxId: 7067]
d1tph1_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d1tpua_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d1tmha_ : (HIS5) (ALA151) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Synthetic, hybrid between Escherichia coli and chicken TIM
d4mkna_ : (PHE6) (GLU155) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d1tpva_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d1tpb1_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
d1tima_ : (PHE6) (VAL154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Chicken (Gallus gallus) [TaxId: 9031]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1