Protein Concepts Dictionary

Tableau information

Concept source:  d2rgwa2  amino acid (a.a.) range (LYS153)(GLY288)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS153)  (GLY158) E1
	  (GLY163)  (SER174) H2
	  (GLU180)  (SER185) E3
	  (LYS193)  (ASN203) H4
	  (ILE204)  (GLU210) E5
	  (SER211)  (ASP216) H6
	  (ASP220)  (THR225) E7
	  (PRO235)  (VAL241) H8
	  (LYS248)  (GLU253) H9
	  (LYS256)  (PRO262) E10
	  (ASP270)  (LEU276) H11
	  (LYS280)  (GLY288) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2     -161.1°   H2                                                                           
E3      -15.1° -163.6°   E3                                                                    
H4     -172.2°   11.3° -166.1°   H4                                                             
E5      -40.9°  150.4°  -26.4° -143.3°   E5                                                      
H6     -175.7°   20.9°  166.9°   10.7°  140.5°   H6                                               
E7      -19.4° -144.3°  -34.2°  155.0°  -60.3°  158.8°   E7                                        
H8     -156.9°   41.9°  144.9°   30.5°  118.7°  -22.6° -168.1°   H8                                 
H9      176.6°   15.8°  165.2°    4.5°  140.4°   -7.1° -158.9°   26.0°   H9                          
E10     -40.8°  126.6°  -55.9°  135.4°  -81.2°  136.7°  -22.4° -151.2° -138.3°   E10                  
H11    -156.2°   34.5° -161.5°   28.3°  143.4°   19.5° -144.1°   30.2°  -26.1° -122.2°   H11           
H12     -93.5°   77.6° -108.5°   84.0° -132.0°   83.9°  -75.1°  101.2°   86.1°  -52.8°  -71.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3npma2 :   (HIS156)  (ARG306)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d1ekxa2 :   (LEU155)  (ASN305)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d1gq3c2 :   (HIS156)  (ASN305)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d3e2pa2 :   (LYS153)  (GLY288)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d3e2pk2 :   (LYS153)  (GLY288)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d2rgwa2 :   (LYS153)  (GLY288)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Methanococcus jannaschii [TaxId: 2190]
 d3mpua2 :   (HIS156)  (ASN305)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1ekxb2 :   (HIS156)  (ASN305)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d4eknb2 :   (LYS153)  (GLY288)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
 d3e2pb2 :   (LYS153)  (GLY288)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.78