Protein Concepts Dictionary

Tableau information

Concept source:  d3ijra_  amino acid (a.a.) range (ASN46)(PRO225)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN46)   (THR50) E1
	   (GLY55)   (GLY68) H2
	   (ASN70)   (LEU76) E3
	   (GLY80)   (LYS91) H4
	   (LYS95)  (GLY101) E5
	  (ASP105)  (GLY121) H6
	  (ASN124)  (ASN128) E7
	  (THR143)  (ILE155) H8
	  (ILE155)  (LEU169) H9
	  (GLY172)  (THR178) E10
	  (ILE191)  (LEU211) H11
	  (GLY215)  (PRO225) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2     -174.2°   H2                                                                           
E3      -14.7° -167.9°   E3                                                                    
H4      157.1°  -20.1°  171.8°   H4                                                             
E5      -27.5°  157.9°  -16.8°  164.6°   E5                                                      
H6      156.0°  -18.3°  158.1°  -25.5°  165.7°   H6                                               
E7       -8.3°  166.8°  -23.0°  148.9°  -35.3°  150.6°   E7                                        
H8     -171.2°    6.5°  174.0°  -14.2°  159.9°  -20.9° -162.9°   H8                                 
H9      165.5°  -20.0°  151.6°  -36.1°  138.0°  -36.6° -172.8°  -22.9°   H9                          
E10     -18.7°  155.5°  -30.8°  142.2°  -45.9°  137.9°  -13.1°  154.1°  173.4°   E10                  
H11     153.3°  -32.1°  146.9°  -37.6°  130.1°  -50.4°  155.2°  -30.5°  -20.2° -165.8°   H11           
E12     -41.7°  132.5°  -52.6°  121.5°  -68.5°  115.2°  -35.5°  131.5°  151.7°  -23.0° -157.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ojfa_ :     (LYS7)  (GLY191)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Bacillus cereus [TaxId: 226900]
 d1dcta_ :     (MET1)  (LEU141)   [view usage] : c.66.1.26 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |C5 cytosine-specific DNA methylase, DCM |DNA methylase HaeIII |Haemophilus aegyptius [TaxId: 197575]
 d2bgka1 :    (LYS17)  (ILE199)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Rhizome secoisolariciresinol dehydrogenase |Mayapple (Podophyllum peltatum) [TaxId: 35933]
 d3ijrf_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3itda_ :    (LYS19)  (GLY199)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Cochliobolus lunatus [TaxId: 5503]
 d3i3of_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3i3oc_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d4fj1c_ :    (LYS19)  (GLY199)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Cochliobolus lunatus [TaxId: 5503]
 d3qwic_ :    (LYS19)  (GLY199)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Cochliobolus lunatus [TaxId: 5503]
 d3i3oe_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d4g81a_ :    (LYS11)  (TYR192)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Salmonella enterica [TaxId: 550537]
 d3ijrb_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3is3a_ :    (LYS19)  (GLY199)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Cochliobolus lunatus [TaxId: 5503]
 d1wmba1 :     (LYS5)  (TRP187)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |D(-)-3-hydroxybutyrate dehydrogenase |Pseudomonas fragi [TaxId: 296]
 d3ijra_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d4trrb_ :     (LYS7)  (THR191)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3i3oa_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d1d8aa_ :     (ARG8)  (GLY190)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Escherichia coli [TaxId: 562]
 d3ijrh_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d4kwib_ :     (LYS7)  (GLY191)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Streptomyces cyanogenus [TaxId: 80860]
 d3qwhc_ :    (LYS19)  (GLY199)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Cochliobolus lunatus [TaxId: 5503]
 d3i3ob_ :    (ASN46)  (PRO225)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2,    c.66