Protein Concepts Dictionary

Tableau information

Concept source:  d2qe7a2  amino acid (a.a.) range (GLN163)(GLU345)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN163)  (GLY169) E1
	  (GLY174)  (GLN189) H2
	  (ILE192)  (ILE198) E3
	  (GLN202)  (ASP216) H4
	  (TYR220)  (THR225) E5
	  (ALA232)  (GLY253) H6
	  (HIS255)  (ASP261) E7
	  (LEU263)  (ARG278) H8
	  (ASP289)  (ALA302) H9
	  (GLY311)  (GLN322) E10
	  (TYR329)  (ILE337) H11
	  (ASP339)  (GLU345) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2      146.6°   H2                                                                           
E3      -38.6° -162.0°   E3                                                                    
H4      124.7°  -29.1°  163.3°   H4                                                             
E5      -48.6°  153.7°  -10.4° -172.3°   E5                                                      
H6      148.2°   23.5° -169.2°   25.7°  161.8°   H6                                               
E7      -22.7° -164.1°  -16.0°  147.4°  -26.3° -167.6°   E7                                        
H8      -87.0° -114.9°   50.5° -144.0°   40.2° -124.7°   66.0°   H8                                 
H9      131.9°   18.8°  167.8°  -10.7°  168.6°   23.0° -154.4°  133.5°   H9                          
E10     -18.2°  164.1°  -26.9°  137.8°  -37.2°  154.5°  -13.1°  -77.4° -147.0°   E10                  
H11    -158.2°   23.8°  161.3°  -35.0°  152.2°  -10.1° -171.9°  114.8°  -30.3° -160.9°   H11           
E12     -20.8°  126.7°  -59.3°  104.0°  -69.2°  128.4°  -43.5° -105.9°  111.1°  -37.4° -138.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4huta_ :    (ILE30)  (ARG178)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |automated matches |Salmonella enterica [TaxId: 99287]
 d1c9kb_ :     (MET1)  (SER173)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU |Salmonella typhimurium [TaxId: 90371]
 d1mabb3 :   (GLY150)  (SER336)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Central domain of beta subunit of F1 ATP synthase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3l0ob2 :   (ARG177)  (SER350)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
 d1g64a_ :    (ILE30)  (ARG178)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |ATP:corrinoid adenosyltransferase CobA |Salmonella typhimurium [TaxId: 90371]
 d1fx0a3 :   (GLN164)  (SER346)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Central domain of alpha subunit of F1 ATP synthase |Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
 d2qe7a2 :   (GLN163)  (GLU345)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Bacillus sp. [TaxId: 90973]
 d1bmfa3 :   (ARG164)  (GLU353)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Central domain of alpha subunit of F1 ATP synthase |Cow (Bos taurus) [TaxId: 9913]
 d1fx0b3 :   (GLY166)  (SER353)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Central domain of beta subunit of F1 ATP synthase |Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37