Protein Concepts Dictionary

Tableau information

Concept source:  d4l8wb_  amino acid (a.a.) range (ASN27)(THR161)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN27)   (ALA31) E1
	   (ALA32)   (GLY42) H2
	   (ARG44)   (ILE50) E3
	   (SER53)   (ILE64) H4
	   (GLY66)   (GLY72) E5
	   (SER79)   (GLY99) H6
	  (PHE102)  (CYS108) E7
	  (CYS108)  (GLY120) H8
	  (ALA133)  (THR139) E9
	  (THR139)  (GLY144) H10
	  (SER145)  (PHE151) H11
	  (PRO152)  (THR161) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2       49.9°   H2                                                                           
E3      144.7°  148.9°   E3                                                                    
H4      -25.5°  -29.0° -167.8°   H4                                                             
E5       98.7°  148.3°  -58.6°  120.0°   E5                                                      
H6      -63.7°   25.6°  124.0°  -50.8° -153.1°   H6                                               
E7       88.0°  137.5°  -68.6°  109.3°  -10.8° -145.4°   E7                                        
H8     -114.0°  -89.0°   60.3° -113.0°  111.3°  -63.6° -117.2°   H8                                 
E9      -80.8°  -59.5°   92.2°  -79.4°  127.6°  -34.5°  126.8°   34.2°   E9                          
H10     -78.3°  -35.1°  134.7°  -52.9° -152.5°   48.6° -148.3°   94.5°  -79.4°   H10                  
H11     -44.4°   61.9° -149.0°   38.1°  -93.9°   87.0°  -85.6°  150.6° -117.5°  -64.6°   H11           
H12     110.7° -156.5°  -39.2°  135.6°   22.8° -141.6°   30.7°  -88.6° -108.9°  168.3°  116.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4l8fa_ :    (ASN27)  (THR161)   [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d4l8wb_ :    (ASN27)  (THR161)   [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d4l7qa_ :    (ASN27)  (THR161)   [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d1l9xa_ :    (ARG29)  (VAL163)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |gamma-glutamyl hydrolase |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23