Protein Concepts Dictionary

Tableau information

Concept source:  d1h7ea_  amino acid (a.a.) range (SER1)(ARG155)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER1)   (TYR11) E1
	   (PRO28)   (VAL40) H2
	   (GLU45)   (ASP51) E3
	   (PRO53)   (GLY63) H4
	   (GLY64)   (ARG70) E5
	   (SER75)   (VAL87) H6
	   (ASP90)   (GLN96) E7
	  (ARG105)  (ASP117) H8
	  (PRO121)  (ALA128) E9
	  (SER130)  (ALA135) H10
	  (VAL140)  (THR146) E11
	  (LEU151)  (ARG155) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2      172.1°   H2                                                                           
E3      -30.0°  151.2°   E3                                                                    
H4      127.9°  -52.8°  155.3°   H4                                                             
E5      -67.0°  113.8°  -37.5° -163.2°   E5                                                      
H6      130.3°  -57.1°  126.5°  -51.2°  114.5°   H6                                               
E7      -29.0°  144.4°  -55.4°  108.6°  -88.1°  140.1°   E7                                        
H8      135.3°  -46.8°  105.4°  -95.9°   68.4°  -67.7°  151.3°   H8                                 
E9      -62.8°  110.4°  -86.0°   85.8° -109.8°  135.1°  -33.9°  139.3°   E9                          
H10      57.8° -127.7°   34.3° -140.9°  -35.4°   93.9°   86.5°  -83.5°  119.5°   H10                  
E11     163.0°  -11.2°  141.8°  -62.8°  105.0°  -66.4° -141.7°   41.3° -108.9° -124.7°   E11           
E12     -14.2°  163.5°  -43.9°  113.7°  -81.2°  124.5°   22.9° -149.3°   55.7°   68.4°  164.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2y6pc_ :     (VAL5)  (ARG149)   [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
 d1gq9a_ :     (SER1)  (ARG155)   [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase |Escherichia coli, KpsU [TaxId: 562]
 d3duvb_ :     (THR4)  (GLY187)   [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |automated matches |Haemophilus influenzae [TaxId: 727]
 d1vica_ :     (PHE3)  (ARG157)   [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase |Haemophilus influenzae [TaxId: 727]
 d2y6pa_ :     (ARG2)  (ARG149)   [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
 d1h7ea_ :     (SER1)  (ARG155)   [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase |Escherichia coli, KpsU [TaxId: 562]
 d2y6pb_ :     (ARG2)  (ARG149)   [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
 d1gqca_ :     (SER1)  (ARG155)   [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase |Escherichia coli, KpsU [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.68