Tableau information
Concept source: d1sqya1 amino acid (a.a.) range (VAL6)(PHE152)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEEEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL6) (SER12) E1
(SER12) (ARG30) H2
(PRO32) (LYS38) E3
(SER41) (ASN52) H4
(ASP55) (ASP60) E5
(ASP60) (LEU69) H6
(LYS73) (GLY83) E7
(ARG86) (THR90) E8
(THR90) (ALA96) E9
(LEU112) (THR117) E10
(ARG121) (ARG133) H11
(GLU146) (PHE152) H12
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 151.0° H2
E3 -32.9° -162.6° E3
H4 158.0° -46.5° 125.5° H4
E5 -47.4° 125.2° -70.5° -147.1° E5
H6 119.7° -86.0° 86.9° -39.6° -132.9° H6
E7 -75.2° 79.6° -108.1° 125.7° -55.7° -165.0° E7
E8 80.4° -125.4° 48.0° -79.2° 102.8° -39.7° 154.9° E8
E9 11.6° 159.4° -30.5° -154.1° -41.9° -114.5° 80.1° -74.9° E9
E10 -148.0° -31.3° 132.4° 30.7° 156.5° -62.9° 105.0° -98.7° 157.6° E10
H11 65.5° -131.8° 64.2° -114.0° -42.0° 91.2° -95.3° 69.0° -54.2° -144.1° H11
H12 -41.4° 113.7° -74.2° 160.0° 34.9° -160.3° 34.3° 120.7° 45.8° -134.9° 75.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1sqya1 : (VAL6) (PHE152) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1vfea_ : (SER5) (PHE152) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1n76a1 : (VAL6) (ASN137) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1h45a_ : (VAL6) (PHE152) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1a8ea_ : (LYS4) (LEU146) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1fcka1 : (VAL6) (PHE152) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1h43a_ : (VAL6) (PHE152) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1jw1a1 : (LYS4) (SER137) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Goat (Capra hircus) [TaxId: 9925]
d1dsna_ : (VAL6) (PHE152) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1l5ta_ : (VAL6) (LEU136) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1lcta_ : (VAL6) (ASN137) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1dtga_ : (LYS4) (PHE153) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94