Protein Concepts Dictionary

Tableau information

Concept source:  d4ok6a1  amino acid (a.a.) range (GLN198)(ALA323)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN198)  (ALA204) E1
	  (GLY209)  (ALA220) H2
	  (LYS224)  (PRO230) E3
	  (SER231)  (GLY247) H4
	  (GLY247)  (GLY255) E5
	  (VAL256)  (THR260) E6
	  (PRO264)  (SER268) E7
	  (THR269)  (ASP276) H8
	  (ASP285)  (CYS289) E9
	  (CYS289)  (THR295) H10
	  (ASP296)  (GLY314) H11
	  (VAL318)  (ALA323) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2      134.8°   H2                                                                           
E3      -57.1°  167.5°   E3                                                                    
H4       81.2°  -53.6°  138.1°   H4                                                             
E5     -105.9°  118.2°  -49.4° -166.2°   E5                                                      
E6      116.6°  -20.1°  171.9°   36.9° -137.4°   E6                                               
E7      -71.8°  152.2°  -15.3° -151.5°  -34.3° -171.5°   E7                                        
H8      162.5°   47.3° -120.3°  -97.9°   71.6°  -67.4°  105.0°   H8                                 
E9      -48.3°  174.2°  -12.7°  129.1°  -60.3°  159.1°  -27.4° -131.9°   E9                          
H10     -76.7°  147.5°   23.6°  155.8°  -36.5° -156.7°   19.2° -106.1°   28.5°   H10                  
H11     139.0°   13.1° -161.0°  -59.9°  114.8°  -23.1°  148.4°   48.4° -161.1° -137.6°   H11           
E12     -14.2°  146.3°  -46.1°   93.4°  -95.5°  126.7°  -61.3° -164.7°  -35.7°  -63.5°  146.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ojqa1 :   (GLN198)  (ALA323)   [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
 d3kqha1 :   (GLN198)  (ALA323)   [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
 d4ok6a1 :   (GLN198)  (ALA323)   [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
 d1heia1 :   (GLN198)  (ALA323)   [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
 d2zjoa1 :   (ALA196)  (ALA323)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Hepatitis c virus (isolate taiwan) [TaxId: 31645]
 d8ohma1 :   (THR196)  (ALA323)   [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
 d4ok5a1 :   (GLN198)  (ALA323)   [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37