Protein Concepts Dictionary

Tableau information

Concept source:  d3keja_  amino acid (a.a.) range (LEU118)(TYR266)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU118)  (ASN124) E1
	  (THR130)  (THR149) H2
	  (PRO150)  (ARG155) E3
	  (ASP162)  (PHE167) E4
	  (LEU185)  (PHE189) E5
	  (PRO193)  (ASP198) H6
	  (ASP198)  (ASP202) E7
	  (ASP204)  (SER209) E8
	  (GLY213)  (PHE217) E9
	  (PHE217)  (GLY229) H10
	  (ALA238)  (PHE241) H11
	  (ASP256)  (TYR266) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2      158.4°   H2                                                                           
E3      -31.4°  165.0°   E3                                                                    
E4      -23.8°  138.9°  -53.9°   E4                                                             
E5      137.5°  -53.5°  111.7°  158.5°   E5                                                      
H6      -67.1°  106.3°  -88.6°  -46.7° -154.7°   H6                                               
E7      -32.1°  131.1°  -62.1°   -8.4°  164.0°  -40.3°   E7                                        
E8     -121.5°   70.9° -114.6° -111.5°  -88.6°   68.6°  107.3°   E8                                 
E9     -148.2°  -52.8° -117.1° -163.2°  -32.2°  125.2° -163.3°  -56.9°   E9                          
H10     132.9°  -47.7°  117.8°  144.6°  -21.3°  152.8°  145.8° -103.0°  -50.6°   H10                  
H11       7.7° -157.4°   28.4°   30.2° -130.1°   74.7°   38.4°  127.9° -145.0° -125.3°   H11           
H12     122.2°  -69.9°   95.4°  145.2°   16.4° -163.7°  152.9°  -95.4°  -39.5°   31.3° -115.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1jk3a_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d1japa_ :    (ARG98)  (GLY242)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Neutrophil collagenase (MMP-8) |Human (Homo sapiens) [TaxId: 9606]
 d3keka_ :   (LEU118)  (TYR266)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d1xuca_ :   (ASN117)  (TYR266)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d3keja_ :   (LEU118)  (TYR266)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d1a85a_ :    (LEU93)  (TYR241)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Neutrophil collagenase (MMP-8) |Human (Homo sapiens) [TaxId: 9606]
 d2ozrd_ :    (ASN96)  (TYR245)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d1rmza_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d456cb_ :   (ASN117)  (TYR266)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d4gr8a_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4l19b_ :   (LEU118)  (TYR266)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d3uvcb_ :   (ASN119)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3kejb_ :   (LEU118)  (TYR266)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d3ljzd_ :   (LEU118)  (TYR266)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d2w0dc_ :   (ASN119)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92