Protein Concepts Dictionary

Tableau information

Concept source:  d4ldbc1  amino acid (a.a.) range (ASN49)(PRO185)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN49)   (ALA55) E1
	   (ASP60)   (THR65) H2
	   (SER68)   (GLY84) E3
	   (PRO85)   (MET89) E4
	   (ILE92)   (PRO97) E5
	   (GLY99)  (GLN103) E6
	  (SER107)  (ILE115) H7
	  (ALA118)  (ALA128) E8
	  (LEU132)  (LEU138) E9
	  (GLY153)  (LEU158) E10
	  (GLN170)  (LEU176) E11
	  (LEU179)  (PRO185) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
H2      -86.2°   H2                                                                           
E3      144.2° -127.9°   E3                                                                    
E4      -22.6°   84.1° -135.1°   E4                                                             
E5      -62.5°   24.3°  152.2°   64.7°   E5                                                      
E6      -53.1°  -64.2°  145.5°  -72.2°  -46.3°   E6                                               
H7     -149.4°  124.4°   -8.5° -143.3°  148.0°  138.0°   H7                                        
E8      120.4°   86.0°  -60.4°   97.8°  102.7°  149.0°   65.6°   E8                                 
E9      -80.6°  -82.8°  111.1° -102.6°  -74.5°  -34.5°  103.6°  155.5°   E9                          
E10      94.7°  108.6°  -66.5°   74.2°  113.7°  146.2°  -74.7°  -35.0°  167.5°   E10                  
E11      55.6° -103.8°  115.6°  -77.8°  -85.0°  -39.7° -111.9°  168.6°  -34.6°  134.1°   E11           
E12     -33.7°   55.8°  157.3°   29.0°  -35.8°  -57.0°  165.0°  100.1°  -91.4°   90.9°  -81.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1es6a1 :    (GLY44)  (PRO185)   [view usage] : b.31.1.1 |EV matrix protein |EV matrix protein |EV matrix protein |EV matrix protein |Ebola virus [TaxId: 205488]
 d4ldbc1 :    (ASN49)  (PRO185)   [view usage] : b.31.1.1 |EV matrix protein |EV matrix protein |EV matrix protein |automated matches |Ebola virus [TaxId: 186538]
 d4ldbb1 :    (ASN49)  (PRO185)   [view usage] : b.31.1.1 |EV matrix protein |EV matrix protein |EV matrix protein |automated matches |Ebola virus [TaxId: 186538]
 d3tcqa1 :    (ASN49)  (PRO185)   [view usage] : b.31.1.1 |EV matrix protein |EV matrix protein |EV matrix protein |automated matches |Sudan ebolavirus [TaxId: 128948]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.31