Protein Concepts Dictionary

Tableau information

Concept source:  d1d6ha2  amino acid (a.a.) range (ILE254)(ILE389)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEHHHEHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE254)  (LEU258) E1
	  (GLY262)  (LEU267) E2
	  (VAL271)  (ASN278) H3
	  (THR280)  (ALA286) H4
	  (ASP294)  (PHE299) H5
	  (PHE299)  (HIS303) E6
	  (PRO307)  (LEU317) H7
	  (LYS320)  (ASN325) H8
	  (ASN325)  (GLY335) H9
	  (CYS341)  (GLY357) H10
	  (GLU366)  (GLY372) E11
	  (LEU377)  (ILE389) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      167.3°   E2                                                                           
H3     -122.8°   61.5°   H3                                                                    
H4      -91.4°   94.5°  -33.3°   H4                                                             
H5       39.4° -153.3°  104.0°   71.9°   H5                                                      
E6       47.5° -121.8°  148.7°  132.8°  -82.7°   E6                                               
H7     -153.6°   28.8°  -32.7°  -65.8° -132.9°  142.5°   H7                                        
H8      -10.8°  173.3°  114.5°   82.1°   30.3°  -58.3°  146.9°   H8                                 
H9       35.7° -140.5°  158.0°  125.0°   56.9°  -31.2° -169.2°  -43.5°   H9                          
H10     120.5°  -72.2°  -59.9°  -63.5°  -81.1°  150.5°  -62.4°  111.0°  121.0°   H10                  
E11     -53.9°  115.1°  145.1°  135.3°  -89.8°   -7.2°  135.3°  -64.7°  -37.9°  154.9°   E11           
E12     102.0°  -90.2°  -57.1°  -47.1°   63.5°  144.8°  -72.8°   91.6°  114.3°  -22.3°  151.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1d6ia2 :   (ILE254)  (ALA388)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d1bi5a2 :   (ALA253)  (ALA388)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d1qlvb2 :   (ALA258)  (ARG393)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Pyrone synthase (PyS, chalcone synthase 2) |Gerbera hybrid cultivar [TaxId: 18101]
 d3wd8a2 :   (ILE254)  (ILE389)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Citrus microcarpa [TaxId: 164113]
 d1i86a2 :   (ALA253)  (ALA388)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d1i89a2 :   (ALA253)  (ALA388)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d1tvza2 :   (ASP184)  (GLU320)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |3-hydroxy-3-methylglutaryl CoA synthase MvaS |Staphylococcus aureus [TaxId: 1280]
 d1d6ha2 :   (ILE254)  (ILE389)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d2h84a2 :  (ALA3016) (VAL3147)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Dictyostelium discoideum [TaxId: 352472]
 d1ee0a2 :   (ALA258)  (ARG393)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Pyrone synthase (PyS, chalcone synthase 2) |Gerbera hybrid cultivar [TaxId: 18101]
 d1i88a2 :   (ALA253)  (ALA388)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95