Protein Concepts Dictionary

Tableau information

Concept source:  d2odfc_  amino acid (a.a.) range (ALA15)(HIS213)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEHHEHHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA15)   (ASN20) E1
	   (ASP26)   (GLU32) E2
	   (SER48)   (TRP58) H3
	   (GLY61)   (PHE73) H4
	   (ALA75)   (GLN80) E5
	   (SER95)  (PRO100) H6
	  (GLU116)  (GLY145) H7
	  (ARG146)  (VAL159) E8
	  (GLU168)  (ASP174) E9
	  (SER177)  (GLU188) H10
	  (LEU192)  (ARG196) E11
	  (THR207)  (HIS213) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      154.1°   E2                                                                           
H3      -49.7°  151.3°   H3                                                                    
H4      -29.7° -169.7°   35.5°   H4                                                             
E5      172.3°  -19.2°  137.9° -155.1°   E5                                                      
H6       97.8°   65.3° -143.2° -107.8°  -75.1°   H6                                               
H7      -19.1°  172.6°  -32.2°   15.5°  167.9°  112.4°   H7                                        
E8      121.3°  -34.9° -141.8°  150.9°  -53.5°   65.2°  137.8°   E8                                 
E9     -102.6°  103.2°  -57.7°  -75.3°   84.5° -131.5°  -83.5°  131.6°   E9                          
H10      61.1°  -94.0°   99.1°   90.8° -113.2°   72.2°   78.6°  -60.1° -155.0°   H10                  
E11    -120.0°   84.8°  -70.8°  -95.7°   67.6° -133.2° -101.1°  109.4°  -22.5° -148.9°   E11           
H12     -67.9°  136.5°  -41.5°  -38.3°  117.7° -117.2°  -50.8°  170.7°  -39.6°  129.0°  -62.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2odfc_ :    (ALA15)  (HIS213)   [view usage] : c.56.5.9 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |FGase-like |Hypothetical protein Atu2144 |Agrobacterium tumefaciens [TaxId: 358]
 d2odfd_ :    (ALA15)  (HIS213)   [view usage] : c.56.5.9 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |FGase-like |Hypothetical protein Atu2144 |Agrobacterium tumefaciens [TaxId: 358]
 d2odfa1 :    (ALA15)  (HIS213)   [view usage] : c.56.5.9 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |FGase-like |Hypothetical protein Atu2144 |Agrobacterium tumefaciens [TaxId: 358]
 d2odfe_ :    (ALA15)  (HIS213)   [view usage] : c.56.5.9 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |FGase-like |Hypothetical protein Atu2144 |Agrobacterium tumefaciens [TaxId: 358]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56