Protein Concepts Dictionary

Tableau information

Concept source:  d3ucha_  amino acid (a.a.) range (PRO140)(ILE294)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO140)  (GLY149) E1
	  (GLY154)  (LEU159) E2
	  (ARG161)  (PRO166) H3
	  (PRO166)  (THR177) H4
	  (HIS190)  (PRO194) E5
	  (PHE196)  (ASP202) E6
	  (LEU234)  (SER239) E7
	  (SER246)  (CYS252) E8
	  (THR255)  (LYS261) H9
	  (LYS261)  (GLU270) E10
	  (LEU272)  (ALA280) H11
	  (GLN290)  (ILE294) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      157.0°   E2                                                                           
H3      101.2°  -63.1°   H3                                                                    
H4       49.7° -149.4° -111.3°   H4                                                             
E5      -89.3°   87.0°  124.3° -116.5°   E5                                                      
E6       95.9°  -90.3°  -60.0°   63.8° -172.5°   E6                                               
E7       70.7°  -90.2°   31.6°   96.6°  114.5°  -72.5°   E7                                        
E8      -78.2°  102.6°  139.6°  -99.0°  -17.7°  160.0°  121.9°   E8                                 
H9      129.6°  -48.2°   39.0°  107.0° -135.0°   43.4°   69.1° -150.6°   H9                          
E10     -80.3°  120.8° -158.2°  -53.2°  -77.3°   98.2° -148.1°  -62.2° -124.9°   E10                  
H11      38.1° -120.1°   65.7°   78.1°  -97.7°   89.7°   34.2°  -96.7°  101.9°  118.4°   H11           
E12     151.3°  -47.4°  -80.0° -102.8°  114.0°  -59.5° -110.6°  119.5°  -41.6°   88.5° -142.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4e1qa_ :     (PRO4)  (ILE165)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Wheat (Triticum aestivum) [TaxId: 4565]
 d4jcpa_ :     (PRO4)  (ILE165)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Nematode (Brugia malayi) [TaxId: 6279]
 d3k0oa_ :     (PRO4)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]
 d3icha_ :    (THR11)  (ILE167)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4lqwa_ :     (ASN3)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1zmfa_ :   (ASN139)  (ILE294)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1dywa_ :     (SER4)  (LYS172)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Caenorhabditis elegans, isoform 3 [TaxId: 6239]
 d4i9ya_ :     (PRO4)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2cfea1 :     (ASN3)  (ILE156)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin-like allergen Mal s 6 |Malassezia sympodialis [TaxId: 76777]
 d3k0pa_ :     (PRO4)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]
 d1c5fk_ :     (ARG7)  (GLU175)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Nematode (Brugia malayi) [TaxId: 6279]
 d3ucha_ :   (PRO140)  (ILE294)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ihga2 :    (PRO16)  (ILE178)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin 40 isomerase domain |Cow (Bos taurus) [TaxId: 9913]
 d1z81a1 :    (ASN40)  (GLU209)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Plasmodium yoelii [TaxId: 5861]
 d4dgda_ :     (MET1)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Rhesus monkey (Macaca mulatta) [TaxId: 9544]
 d1m9eb_ :     (PRO4)  (GLN163)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]
 d1awsa_ :  (ASN1003) (ILE1158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]
 d4dgea_ :     (PRO4)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Rhesus monkey (Macaca mulatta) [TaxId: 9544]
 d1awqa_ :  (PRO1004) (ILE1158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]
 d3o7ta_ :     (ASN3)  (THR161)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Moniliophthora perniciosa [TaxId: 153609]
 d2r99a_ :   (PRO140)  (ILE294)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidyl-prolyl cis-trans isomerase E, PPIE, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d2ck1a_ :    (PRO11)  (ILE165)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d1m9ea_ :     (PRO4)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]
 d4eyva_ :     (ASN5)  (ILE158)   [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |automated matches |Piriformospora indica [TaxId: 65672]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.62