Protein Concepts Dictionary

Tableau information

Concept source:  d1s8oa2  amino acid (a.a.) range (SER238)(ASN359)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEHHEEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER238)  (THR243) E1
	  (ARG247)  (VAL253) E2
	  (PRO259)  (HIS265) E3
	  (SER270)  (TRP274) H4
	  (TRP274)  (GLY285) H5
	  (ARG287)  (MET293) E6
	  (SER299)  (PRO303) E7
	  (GLU304)  (CYS309) H8
	  (LEU313)  (GLY325) H9
	  (VAL330)  (ASP335) E10
	  (ASP335)  (PHE347) H11
	  (ARG353)  (ASN359) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      161.5°   E2                                                                           
E3      -77.5°  109.7°   E3                                                                    
H4      136.6°  -26.9°  130.1°   H4                                                             
H5      103.6°  -67.9°  175.3°   46.2°   H5                                                      
E6      -53.6°  134.6°  -25.0°  151.9°  157.0°   E6                                               
E7      -39.0° -141.8°  -39.5°  144.7°  140.5°  -19.9°   E7                                        
H8      114.8°  -48.1° -136.4°  -21.8°   38.9° -146.9° -130.6°   H8                                 
H9      115.1°  -69.2°  145.3°  -63.9°  -38.4°  142.2°  148.5°  -70.2°   H9                          
E10     -84.7°  100.7°   -9.9°  120.3°  165.9°  -33.9°  -45.8° -127.3°  147.0°   E10                  
H11      59.2° -107.8°  134.1°  -81.3°  -45.7°  112.4°   94.9°   61.9°  -73.7° -137.9°   H11           
E12    -103.0°   81.8°  -28.0°  102.6°  148.8°  -52.8°  -64.0° -113.5°  136.0°  -18.9° -149.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1s8oa2 :   (SER238)  (ASN359)   [view usage] : c.69.1.11 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Epoxide hydrolase |Mammalian epoxide hydrolase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1cv2a_ :    (GLU10)  (GLU132)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
 d4x00a_ :    (TYR14)  (ASP137)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d1vj5a2 :   (SER236)  (LEU356)   [view usage] : c.69.1.11 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Epoxide hydrolase |Mammalian epoxide hydrolase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d2o2ia_ :    (GLN11)  (GLU133)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1mj5a_ :    (GLU10)  (GLU132)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
 d1cqza2 :   (SER236)  (ASN357)   [view usage] : c.69.1.11 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Epoxide hydrolase |Mammalian epoxide hydrolase, C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
 d3wk4a2 :   (SER238)  (LEU358)   [view usage] : c.69.1.11 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Epoxide hydrolase |Mammalian epoxide hydrolase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1iz7a_ :    (GLU10)  (GLU132)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
 d2o2ha_ :    (GLN11)  (GLU133)   [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69