Protein Concepts Dictionary

Tableau information

Concept source:  d2nroa3  amino acid (a.a.) range (ARG179)(GLN310)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG179)  (THR185) E1
	  (GLU188)  (PRO192) E2
	  (GLY199)  (TYR202) E3
	  (ASN205)  (GLY217) H4
	  (GLU219)  (LEU223) E5
	  (ASP229)  (GLN243) H6
	  (ASP245)  (GLY251) E7
	  (THR261)  (GLU267) H8
	  (GLU270)  (LYS275) E9
	  (LYS282)  (LYS288) E10
	  (TRP293)  (PRO298) E11
	  (ASN300)  (GLN310) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2     -117.7°   E2                                                                           
E3     -148.0°  -33.4°   E3                                                                    
H4      172.2°  -58.8°   31.6°   H4                                                             
E5      -26.5° -120.1° -136.8° -160.9°   E5                                                      
H6     -168.0°   57.4°   32.4°    4.2°  164.9°   H6                                               
E7      -22.1°  104.1°  137.5°  150.1°  -47.6°  145.9°   E7                                        
H8      152.0°  -86.2°   52.8°  -35.1°  129.7°  -38.9° -169.2°   H8                                 
E9      -62.0°   91.5°  116.5°  110.5°  -88.4°  106.3°  -41.6°  136.4°   E9                          
E10     130.2°  -85.1°  -56.1°  -57.5°  103.8°  -61.7°  151.0°   31.2°  167.3°   E10                  
E11     -31.5°   99.2°  132.2°  140.7°  -57.2°  136.5°   -9.5° -167.1°  -32.5°  160.2°   E11           
H12     163.1°  -79.0°  -48.7°  -20.8°  148.2°  -23.5°  158.8°  -19.3°  118.1°  -49.2°  150.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2nroa3 :   (ARG179)  (GLN310)   [view usage] : c.57.1.2 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MoeA central domain-like |MoeA, central domain |Escherichia coli [TaxId: 562]
 d2nqsa3 :   (VAL178)  (GLN310)   [view usage] : c.57.1.2 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MoeA central domain-like |MoeA, central domain |Escherichia coli [TaxId: 562]
 d1g8la3 :   (ARG179)  (GLN310)   [view usage] : c.57.1.2 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MoeA central domain-like |MoeA, central domain |Escherichia coli [TaxId: 562]
 d1fc5a3 :   (ARG179)  (SER320)   [view usage] : c.57.1.2 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MoeA central domain-like |MoeA, central domain |Escherichia coli [TaxId: 562]
 d2nqua3 :   (ARG179)  (GLY321)   [view usage] : c.57.1.2 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MoeA central domain-like |MoeA, central domain |Escherichia coli [TaxId: 562]
 d2nqva3 :   (ARG179)  (GLN310)   [view usage] : c.57.1.2 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MoeA central domain-like |MoeA, central domain |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.57