Protein Concepts Dictionary

Tableau information

Concept source:  d1cela_  amino acid (a.a.) range (SER8)(SER148)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER8)   (SER20) E1
	   (GLY23)   (ILE34) E2
	   (ARG39)   (ALA43) E3
	   (ASN64)   (ASN70) H4
	   (ASN70)   (ALA76) E5
	   (ALA77)   (GLY83) H6
	   (GLY83)   (GLY88) E7
	   (ASN89)   (PHE95) E8
	  (VAL104)  (LEU110) E9
	  (GLN118)  (LEU123) E10
	  (GLY124)  (SER134) E11
	  (TYR145)  (SER148) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      158.9°   E2                                                                           
E3     -141.5°   40.6°   E3                                                                    
H4     -101.0°   99.9°   90.8°   H4                                                             
E5       64.5°  127.9°  143.8°  -54.2°   E5                                                      
H6      -88.3°   75.8°  111.3°  130.9°  -89.4°   H6                                               
E7       42.0° -157.1° -120.1°  -63.6°  -56.8° -126.7°   E7                                        
E8     -130.4°   32.5°   70.8°  118.0°  114.5°   43.3°  169.1°   E8                                 
E9      -53.8°  134.1°   93.6°  -79.4°  -89.1° -138.0°  -32.4° -155.8°   E9                          
E10      30.6° -128.4° -130.7° -130.8°   84.6°  -64.4°   71.9° -102.0°   73.7°   E10                  
E11     123.9°  -60.1°   94.6°   74.1°   69.0°  -61.4°  123.7°  -50.7°  152.3° -118.7°   E11           
E12     -84.6°   94.7°   57.2°  -99.7° -130.4°  129.4°  -74.1°  115.1°  -41.8°  -86.8°  151.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1cela_ :     (SER8)  (SER148)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]
 d1q2ea_ :     (SER8)  (SER148)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]
 d3pfja_ :     (ALA8)  (ALA140)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |automated matches |Talaromyces emersonii [TaxId: 68825]
 d2yoka_ :    (ALA25)  (PRO172)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |automated matches |Hypocrea lixii [TaxId: 5544]
 d4csia_ :     (THR8)  (SER149)   [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |automated matches |Humicola grisea [TaxId: 5528]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29