Protein Concepts Dictionary

Tableau information

Concept source:  d3ifta_  amino acid (a.a.) range (LEU8)(THR120)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU8)   (ALA12) E1
	   (GLU15)   (ARG19) E2
	   (ASP23)   (ILE29) E3
	   (THR30)   (GLY38) H4
	   (VAL41)   (PRO46) E5
	   (PHE58)   (THR64) E6
	   (SER66)   (ALA72) E7
	   (SER79)   (ASP84) E8
	   (THR88)   (PRO96) H9
	   (PRO96)  (TRP101) H10
	  (LEU103)  (SER109) E11
	  (ALA114)  (THR120) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      148.4°   E2                                                                           
E3      -57.5°  153.7°   E3                                                                    
H4       53.3° -148.4°  -34.7°   H4                                                             
E5       93.8°  -55.2°  151.1°  126.6°   E5                                                      
E6      -82.0°  129.5°  -24.6°  -46.0°  172.5°   E6                                               
E7      116.9°  -31.6°  170.0° -150.8°  -26.3°  160.0°   E7                                        
E8      -93.5°  118.0°  -37.6°  -49.4° -163.2°   14.5°  149.6°   E8                                 
H9      -99.4°   77.6°  -96.4° -130.2°   91.5°  -95.3°   75.9°  102.2°   H9                          
H10      94.9°  -75.2°  115.5°   81.1°  -58.9°  115.1°  -72.1°  105.4° -147.9°   H10                  
E11      96.9°  -52.2°  149.7°  142.6°   21.3° -165.2°   21.3°  168.0°  -70.2°  -79.7°   E11           
H12      44.7° -150.0°   32.0°   58.7°  128.7°  -51.2°  138.0°  -65.7°  -72.7°  134.3°  118.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3a7ab_ :     (LEU7)  (LEU115)   [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Protein H of glycine cleavage system |Escherichia coli K-12 [TaxId: 83333]
 d3hgba_ :    (LEU30)  (THR142)   [view usage] : b.84.1.0 |Barrel-sandwich hybrid |Single hybrid motif |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3a7la_ :     (LEU7)  (SER114)   [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Protein H of glycine cleavage system |Escherichia coli K-12 [TaxId: 83333]
 d3klra_ :     (VAL2)  (GLU109)   [view usage] : b.84.1.0 |Barrel-sandwich hybrid |Single hybrid motif |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1onla_ :     (ARG7)  (GLU113)   [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Protein H of glycine cleavage system |Thermus thermophilus [TaxId: 274]
 d3ifta_ :     (LEU8)  (THR120)   [view usage] : b.84.1.0 |Barrel-sandwich hybrid |Single hybrid motif |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.84