Protein Concepts Dictionary

Tableau information

Concept source:  d1g65f_  amino acid (a.a.) range (THR35)(LYS206)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEEHHEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR35)   (LYS41) E1
	   (GLY45)   (SER56) E2
	   (LYS66)   (ASP71) E3
	   (HIS73)   (SER79) E4
	   (ILE82)  (LYS104) H5
	  (ILE109)  (TYR126) H6
	  (SER135)  (VAL141) E7
	  (GLY145)  (PRO153) E8
	  (GLY155)  (GLY159) E9
	  (LYS161)  (GLY166) E10
	  (ARG169)  (PRO180) H11
	  (SER185)  (LYS206) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      166.7°   E2                                                                           
E3      -39.3° -146.8°   E3                                                                    
E4     -146.4°   39.0°  150.5°   E4                                                             
H5       31.7° -150.9°  -10.7°  160.3°   H5                                                      
H6     -144.1°   49.0°  118.7°  -34.9°  129.4°   H6                                               
E7       28.9° -141.5°  -40.3°  166.8°  -29.7°  158.2°   E7                                        
E8     -149.2°   43.7°  124.3°  -30.1°  135.1°    5.9°  163.1°   E8                                 
E9      -41.8°  125.9°  -78.0°  123.5°  -67.9° -156.0°  -43.4°  153.0°   E9                          
E10     176.3°  -13.8°  137.6°   37.2°  144.9°   36.9° -148.2°   32.1°  139.7°   E10                  
H11     -14.1°  153.9°  -52.8° -139.4°  -44.1° -151.8°   31.1° -155.3°   28.0°  167.7°   H11           
H12     156.1°  -32.1°  145.8°   11.4°  156.6°  -27.2° -172.8°  -21.6°  133.5°  -27.2°  150.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4g4sg_ :    (THR35)  (LYS208)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d1z7qg1 :    (THR34)  (HIS203)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1g0uc_ :    (THR35)  (GLN202)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1irug_ :    (SER34)  (HIS201)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d1g65f_ :    (THR35)  (LYS206)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2ku2a_ :    (SER35)  (SER200)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Thermoplasma acidophilum [TaxId: 2303]
 d1pmaa_ :    (SER35)  (SER200)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Thermoplasma acidophilum [TaxId: 2303]
 d1g65g_ :    (ILE35)  (GLY202)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1iru2_ :     (THR9)  (ARG179)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d1g3ig_ :     (THR1)  (ILE159)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |HslV (ClpQ) protease |Haemophilus influenzae [TaxId: 727]
 d1iruj_ :     (GLY8)  (ASP178)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d1z7qb1 :    (VAL32)  (ARG178)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3sdkf_ :    (THR35)  (HIS180)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2ku1a_ :    (SER35)  (SER200)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Thermoplasma acidophilum [TaxId: 2303]
 d1g0uf_ :    (THR35)  (LYS206)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3unb3_ :     (THR9)  (ARG179)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3unbi_ :     (GLY7)  (ASP177)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3oeuf_ :    (THR35)  (GLY180)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.153