Protein Concepts Dictionary

Tableau information

Concept source:  d1ns8a_  amino acid (a.a.) range (SER2)(ASN176)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER2)    (ARG6) E1
	   (ASP13)   (ASN19) E2
	   (VAL23)   (ASN29) E3
	   (ARG33)   (LYS39) E4
	   (SER50)   (GLU56) H5
	   (GLY62)   (PRO67) E6
	  (THR108)  (LEU114) E7
	  (VAL118)  (ASN127) E8
	  (GLU138)  (ASP147) E9
	  (LYS152)  (ILE158) E10
	  (THR163)  (GLY169) E11
	  (HIS170)  (ASN176) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      165.6°   E2                                                                           
E3      -35.7°  157.9°   E3                                                                    
E4      136.0°  -31.0°  170.6°   E4                                                             
H5      -68.2°  110.0°  -66.5°  117.5°   H5                                                      
E6      -71.3°  119.4°  -40.5°  148.9°  -51.0°   E6                                               
E7     -165.0°   14.4°  153.1°  -33.1°  123.7°  122.7°   E7                                        
E8      -38.6° -149.2°   20.5° -161.7°  -46.0°  -33.4°  156.0°   E8                                 
E9      133.9°  -34.6° -164.9°    7.2°  124.4°  153.9°  -33.4°  166.4°   E9                          
E10     -58.6°  134.8°  -23.1°  165.3°  -66.6°  -22.6°  132.3°  -29.4°  164.1°   E10                  
E11     109.4°  -58.3°  143.4°  -27.3°  119.5°  170.0°  -57.9°  144.6°  -24.6°  164.9°   E11           
E12     114.6°  -51.7°  150.3°  -22.1°  108.3°  156.5°  -55.2°  143.0°  -23.5°  172.3°   14.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1nsua_ :     (SER2)  (ASN176)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
 d1ns0a_ :     (SER2)  (ASN176)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
 d1nsxa_ :     (SER2)  (ASN176)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
 d1nsma_ :     (SER2)  (ASN176)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
 d1l7ka_ :     (SER2)  (ASN176)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
 d1ns2a_ :     (SER2)  (ASN176)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
 d1l7ja_ :     (SER2)  (ASN176)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.30