Protein Concepts Dictionary

Tableau information

Concept source:  d2wbvd_  amino acid (a.a.) range (ALA361)(GLN542)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA361)  (THR367) E1
	  (ARG384)  (THR390) E2
	  (ASN394)  (GLY404) E3
	  (SER416)  (ASP425) E4
	  (GLY443)  (TRP447) E5
	  (THR451)  (ARG455) E6
	  (SER457)  (CYS463) H7
	  (THR472)  (ASP483) E8
	  (ASP483)  (ASP488) H9
	  (ARG493)  (ASN502) E10
	  (THR509)  (ASN518) E11
	  (ASP531)  (GLN542) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      175.9°   E2                                                                           
E3      -12.8°  171.0°   E3                                                                    
E4      131.5°  -45.9°  135.3°   E4                                                             
E5      127.9°  -56.0°  115.1°  -77.8°   E5                                                      
E6     -107.9°   68.0° -120.3°   51.1°  121.9°   E6                                               
H7      -80.3°  101.2°  -79.7° -144.1°   95.6° -109.6°   H7                                        
E8      -55.6°  128.4°  -42.7°  127.2°   72.3° -158.9°   82.1°   E8                                 
H9      -77.9°  106.0°   68.2° -142.0°   64.2°  154.5°   45.8°   42.9°   H9                          
E10     125.8°  -50.1°  136.9°  -31.5° -101.0°   21.5° -120.7°  157.1° -153.8°   E10                  
E11     -52.7°  130.7°  -45.4°  166.3°   90.0° -142.6°   42.4°  -41.1°   26.9°  161.4°   E11           
E12     133.4°  -42.5°  144.5°  -29.6°  -94.2°   27.8°  118.7° -156.8° -146.8°   -7.6°  161.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j1kc1 :   (ALA361)  (GLN542)   [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Canine adenovirus 2 [TaxId: 10514]
 d2wbvb_ :   (PRO362)  (TYR537)   [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |automated matches |Canine adenovirus 2 [TaxId: 10514]
 d2wbva_ :   (ALA361)  (GLN542)   [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |automated matches |Canine adenovirus 2 [TaxId: 10514]
 d2wbvd_ :   (ALA361)  (GLN542)   [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |automated matches |Canine adenovirus 2 [TaxId: 10514]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.21