Protein Concepts Dictionary

Tableau information

Concept source:  d3hzaa_  amino acid (a.a.) range (ALA6)(GLU123)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA6)   (ASP11) E1
	   (GLY13)   (ARG19) E2
	   (VAL27)   (GLU33) E3
	   (GLU33)   (PRO39) E4
	   (GLY40)   (GLY48) E5
	   (GLY48)   (PRO54) E6
	   (GLY56)   (HIS62) E7
	   (SER65)   (VAL71) H8
	   (VAL71)   (ASN77) E9
	   (ILE90)   (ASN96) E10
	  (ALA100)  (HIS106) E11
	  (ILE111)  (GLU123) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      138.7°   E2                                                                           
E3       27.5°  151.9°   E3                                                                    
E4       82.9°   62.7°   89.4°   E4                                                             
E5      110.7° -102.8°  105.0° -165.5°   E5                                                      
E6      171.9°  -40.8° -147.2°  -91.8°  -75.2°   E6                                               
E7      -33.7°  105.6°  -58.7°  -61.1°  128.2°  146.2°   E7                                        
H8       40.3°  102.7°   51.7°  -42.6°  150.9° -133.9°   28.9°   H8                                 
E9      127.8°  -84.0°  100.3°  102.4°  -73.6°  -47.5°  151.1° -122.9°   E9                          
E10     -57.7°   81.8°  -74.6°  -31.2°  155.0°  119.0°  -30.2°  -23.6°  131.4°   E10                  
E11    -103.4°  110.8°  -97.0°  173.5°    8.0°   82.2°  123.6°  143.7°  -75.3°  152.7°   E11           
E12     146.0°  -58.6°  120.6°   86.7°  -84.4°  -26.9°  147.4° -121.2°  -25.6°  117.9°  -89.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4gcya_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1slha_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d3c3ia_ :     (LEU5)  (GLY119)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Paramecium bursaria chlorella virus il3a [TaxId: 46019]
 d1f7ra_ :     (MET1)  (VAL110)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Feline immunodeficiency virus [TaxId: 11673]
 d1slhb_ :     (THR3)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d3c2tb_ :     (LEU5)  (LEU112)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Paramecium bursaria chlorella virus il3a [TaxId: 46019]
 d1sjnb_ :     (THR3)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d2py4a_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d1sm8b_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d1sixa_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d1sm8c_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d3hzaa_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1slhc_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d1sjnc_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]
 d1sjna_ :     (ALA6)  (GLU123)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Mycobacterium tuberculosis, rv2697c [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.85