Protein Concepts Dictionary

Tableau information

Concept source:  d1c3ma_  amino acid (a.a.) range (ALA7)(PRO147)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA7)   (GLY11) E1
	   (LYS19)   (ALA25) E2
	   (THR31)   (LYS36) E3
	   (PHE42)   (TYR48) E4
	   (ILE54)   (LYS60) E5
	   (ALA68)   (ALA74) E6
	   (THR80)   (ALA88) E7
	   (THR96)  (ASN103) E8
	  (LYS104)  (PHE110) E9
	  (SER116)  (LEU122) E10
	  (ALA128)  (ASN133) E11
	  (ILE141)  (PRO147) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2      122.8°   E2                                                                           
E3      -35.3°  148.6°   E3                                                                    
E4      151.0°   28.3°  164.3°   E4                                                             
E5      -42.1° -164.7°  -22.7°  166.2°   E5                                                      
E6      132.4°  -30.4°  167.3°  -26.8°  151.6°   E6                                               
E7      -46.3°  163.4°   15.1° -161.4°  -14.0° -164.8°   E7                                        
E8      126.8°  -16.7° -160.3°   26.0°  159.9°   14.2°  172.6°   E8                                 
E9      -54.0°  157.2°   19.0°  151.1°  -25.5° -170.4°  -11.7°  173.7°   E9                          
E10     147.6°  -28.2° -172.5°   -8.3°  163.3°  -18.7°  165.9°  -20.8°  157.7°   E10                  
E11     -54.0°  169.0°   22.9° -154.5°   16.7°  160.4°   -8.1°  174.2°  -12.0°  157.9°   E11           
E12     140.8°  -35.7° -172.6°   23.1°  150.7°   -9.2° -160.9°   21.3°  161.7°   14.9°  154.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2bmzb_ :     (ALA4)  (PRO141)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Musa acuminata [TaxId: 4641]
 d1c3ka_ :     (ALA7)  (PRO147)   [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Heltuba lectin |Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]
 d1x1vb_ :     (ILE5)  (PRO141)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Musa acuminata [TaxId: 4641]
 d3r50b_ :    (ALA11)  (ALA153)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Sweet potato (Ipomoea batatas) [TaxId: 4120]
 d1x1va_ :     (ALA4)  (PRO141)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Musa acuminata [TaxId: 4641]
 d1c3ma_ :     (ALA7)  (PRO147)   [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Heltuba lectin |Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]
 d2bmyb_ :     (GLY3)  (PRO141)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Musa acuminata [TaxId: 4641]
 d3r52a_ :    (ALA11)  (ALA153)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Sweet potato (Ipomoea batatas) [TaxId: 4120]
 d3r50a_ :    (ALA11)  (ALA153)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Sweet potato (Ipomoea batatas) [TaxId: 4120]
 d1c3na_ :     (ALA7)  (PRO147)   [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Heltuba lectin |Jerusalem artishoke (Helianthus tuberosus) [TaxId: 4233]
 d3r50e_ :     (ALA7)  (ALA153)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Sweet potato (Ipomoea batatas) [TaxId: 4120]
 d2bmya_ :     (ALA4)  (PRO141)   [view usage] : b.77.3.0 |beta-Prism I |Mannose-binding lectins |automated matches |automated matches |Musa acuminata [TaxId: 4641]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.77