Protein Concepts Dictionary

Tableau information

Concept source:  d2awnd1  amino acid (a.a.) range (MET239)(ARG356)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET239)  (PRO243) E1
	  (THR247)  (ILE251) E2
	  (ASP252)  (GLU257) E3
	  (GLN264)  (PRO269) E4
	  (ASN280)  (ARG286) E5
	  (VAL298)  (GLU303) E6
	  (GLN305)  (GLY311) E7
	  (ASN312)  (ILE318) E8
	  (LEU327)  (ASN332) E9
	  (ASP333)  (VAL337) E10
	  (ALA341)  (GLY346) E11
	  (CYS352)  (ARG356) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                  
E2     -119.1°   E2                                                                           
E3       66.2°  171.9°   E3                                                                    
E4     -124.1°  -16.7°  165.4°   E4                                                             
E5      155.3°   72.2° -100.6°   73.5°   E5                                                      
E6       97.6° -141.1°   37.2° -128.3°  -79.7°   E6                                               
E7     -161.2°   45.8° -127.5°   45.9°  -27.7° -100.2°   E7                                        
E8       16.5° -130.4°   56.3° -130.4°  156.1°   83.2°  176.1°   E8                                 
E9     -149.0°   55.7° -116.5°   61.2°   19.7°  -99.3°  -19.6°  162.0°   E9                          
E10      42.2°  161.0°  -24.0° -162.7° -123.2°  -57.6° -150.8°   33.1°  136.1°   E10                  
E11     -87.7°   31.5° -152.6°   41.2°  100.4°  167.0°   76.3° -100.0°   81.6°  129.6°   E11           
E12     -54.5°  -98.3°   89.8°  -89.3°  149.6°   92.5°  130.3°  -47.3°  149.3°  -73.8°  -80.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2awna1 :   (MET239)  (ARG356)   [view usage] : b.40.6.3 |OB-fold |MOP-like |ABC-transporter additional domain |Maltose transport protein MalK, C-terminal domain |Escherichia coli [TaxId: 562]
 d2awnd1 :   (MET239)  (ARG356)   [view usage] : b.40.6.3 |OB-fold |MOP-like |ABC-transporter additional domain |Maltose transport protein MalK, C-terminal domain |Escherichia coli [TaxId: 562]
 d3puza2 :   (MET239)  (ARG356)   [view usage] : b.40.6.3 |OB-fold |MOP-like |ABC-transporter additional domain |Maltose transport protein MalK, C-terminal domain |Escherichia coli [TaxId: 562]
 d2awnb1 :   (MET239)  (ARG356)   [view usage] : b.40.6.3 |OB-fold |MOP-like |ABC-transporter additional domain |Maltose transport protein MalK, C-terminal domain |Escherichia coli [TaxId: 562]
 d1q12a1 :   (MET239)  (ARG356)   [view usage] : b.40.6.3 |OB-fold |MOP-like |ABC-transporter additional domain |Maltose transport protein MalK, C-terminal domain |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.40