Protein Concepts Dictionary

Tableau information

Concept source:  d4kvsa_  amino acid (a.a.) range (ARG36)(LEU241)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG36)   (LEU59) H1
	   (VAL63)   (GLY88) H2
	   (MET93)  (PHE100) H3
	  (ALA101)  (GLY114) H4
	  (THR116)  (SER142) H5
	  (ASP143)  (ASN171) H6
	  (CYS175)  (GLU185) H7
	  (ASN186)  (ALA198) H8
	  (ALA198)  (GLN205) H9
	  (ASP207)  (GLY227) H10
	  (THR230)  (LEU241) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2     -169.0°   H2                                                                    
H3      -48.6°  140.3°   H3                                                             
H4        4.0° -165.1°  -52.4°   H4                                                      
H5     -151.5°   32.5°  135.2° -151.0°   H5                                               
H6       29.5° -156.5°  -21.2°   33.0° -154.5°   H6                                        
H7      159.2°  -14.8°  132.9°  156.8°  -47.1° -144.0°   H7                                 
H8     -160.8°   14.3°  149.8° -157.2°  -22.9° -169.7°  -28.4°   H8                          
H9     -123.5°   59.2° -127.0° -123.1°  -28.0° -136.8°  -74.0°  -46.7°   H9                   
H10     -13.4°  172.4°  -44.9°   16.3°  140.7°  -30.6°  172.2°  158.1°  113.5°   H10           
H11     128.6°  -43.4°  125.5°  126.3°  -75.3°  123.7°  -30.6°  -53.2°  -99.3°  142.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4tw3a_ :    (SER27)  (VAL242)   [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |Hypothetical protein PMT1231 |Prochlorococcus marinus [TaxId: 1219]
 d4pg1a_ :    (ARG36)  (LEU241)   [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |Hypothetical protein PMT1231 |Prochlorococcus marinus [TaxId: 1219]
 d4pg0a_ :    (ARG36)  (LEU241)   [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |Hypothetical protein PMT1231 |Prochlorococcus marinus [TaxId: 1219]
 d4kvsa_ :    (ARG36)  (LEU241)   [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |Hypothetical protein PMT1231 |Prochlorococcus marinus [TaxId: 1219]
 d4kvra_ :    (ARG36)  (LEU241)   [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |Hypothetical protein PMT1231 |Prochlorococcus marinus [TaxId: 1219]
 d4rc6a_ :    (ARG23)  (GLY227)   [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |automated matches |Synechococcus elongatus [TaxId: 1140]
 d2oc5a1 :    (ARG36)  (LEU241)   [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |Hypothetical protein PMT1231 |Prochlorococcus marinus [TaxId: 1219]
 d4kvqa_ :    (SER27)  (ALA239)   [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |Hypothetical protein PMT1231 |Prochlorococcus marinus [TaxId: 1219]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25