Protein Concepts Dictionary

Tableau information

Concept source:  d4f5va1  amino acid (a.a.) range (GLU6)(GLU196)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU6)   (ASP13) H1
	   (GLU16)   (GLN32) H2
	   (TYR36)   (ASP56) H3
	   (ALA59)   (SER65) H4
	   (SER65)   (ARG81) H5
	   (ALA88)   (LYS94) H6
	   (GLU95)  (LYS106) H7
	  (GLU119)  (ASP130) H8
	  (ASP130)  (HIS146) H9
	  (GLU153)  (ALA172) H10
	  (LYS174)  (GLU196) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      120.1°   H2                                                                    
H3      -98.4°  136.7°   H3                                                             
H4       87.2°   64.3° -101.9°   H4                                                      
H5      -97.3°  -58.1°  140.2°  115.2°   H5                                               
H6      123.3°  108.2°   28.6°   88.5° -134.6°   H6                                        
H7      -45.8°   75.1° -143.5°  -73.8°   65.6°  158.7°   H7                                 
H8     -113.7°  126.0°  -28.6° -124.7°  112.0°  -36.7° -155.2°   H8                          
H9      116.1°  -40.1°  107.3°   31.3°  -98.1°   82.7°  -87.8° -116.6°   H9                   
H10     -39.8°  106.4° -116.1°  115.6°   60.6° -144.0°   44.5° -111.6°  131.8°   H10           
H11     137.4°  -68.2°   70.1°   57.4° -118.0°   42.9° -127.8°   76.1°  -40.6°  172.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ot2a1 :     (SER5)  (GLU195)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Horse (Equus caballus) [TaxId: 9796]
 d4po0a1 :     (SER5)  (GLN195)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4f5va1 :     (GLU6)  (GLU196)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1ao6a1 :     (SER5)  (GLN196)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d4lufa1 :     (GLU6)  (LYS187)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Sheep (Ovis aries) [TaxId: 9940]
 d3v09a1 :     (SER5)  (GLU196)   [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.126