Protein Concepts Dictionary

Tableau information

Concept source:  d1xwoc_  amino acid (a.a.) range (THR17)(THR265)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR17)   (THR26) H1
	   (SER27)   (SER35) H2
	   (GLU36)   (GLY53) H3
	   (THR56)   (GLY77) H4
	   (ASP87)  (GLY101) H5
	  (GLY101)  (LEU107) H6
	  (ARG113)  (ILE149) H7
	  (ARG168)  (ASN195) H8
	  (ARG213)  (GLU219) H9
	  (ASN228)  (SER234) H10
	  (ARG236)  (THR265) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2       34.3°   H2                                                                    
H3       86.0°  -57.4°   H3                                                             
H4      -90.5° -118.9° -176.3°   H4                                                      
H5      -92.3°  -62.0°  -58.0°  121.0°   H5                                               
H6       67.0°   84.8°   84.3°  -95.5°  138.8°   H6                                        
H7      -44.5°   76.2°  130.4°  -46.3°  116.2°   74.2°   H7                                 
H8     -117.9°  -85.9°  -32.7°  150.3°  -54.1°  103.2° -162.1°   H8                          
H9      -71.9°   91.1°  144.7°  -32.2°   94.8° -110.4°  -38.1°  145.9°   H9                   
H10     105.5°  125.2° -158.8°   22.3°  103.1°  116.3°   64.2° -130.0°   35.0°   H10           
H11      70.7°   99.9°  156.6°  -19.8°  119.0°   88.4°   26.7° -167.5°  -24.4°  -38.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xwod_ :    (ASP18)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Anser anser [TaxId: 8844]
 d1hy0b_ :    (ASP18)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1i0ab_ :    (ILE20)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
 d1u16a_ :    (PRO19)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d2e9fc_ :    (PRO14)  (THR264)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1k7wd_ :    (ASP20)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1i0aa_ :    (PRO19)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
 d1xwoc_ :    (THR17)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Anser anser [TaxId: 8844]
 d1i0ac_ :    (PRO19)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
 d1i0ad_ :    (ILE20)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
 d1xwoa_ :    (ASP18)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Anser anser [TaxId: 8844]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.127