Protein Concepts Dictionary

Tableau information

Concept source:  d1bccc3  amino acid (a.a.) range (SER29)(ASP253)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER29)   (ALA53) H1
	   (ASP59)   (VAL74) H2
	   (TYR76)  (GLY106) H3
	  (GLY106)  (LYS111) H4
	  (LYS111)  (LEU134) H5
	  (GLY137)  (PRO155) H6
	  (HIS159)  (ALA165) H7
	  (ASN173)  (LEU185) H8
	  (LEU186)  (GLY205) H9
	  (PHE221)  (SER247) H10
	  (SER247)  (ASP253) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      105.5°   H2                                                                    
H3     -152.1° -100.5°   H3                                                             
H4      -68.7°  128.7°  -87.2°   H4                                                      
H5       34.4°  -94.1° -152.9° -101.2°   H5                                               
H6     -111.7°  139.1°   40.5°  -55.8° -126.4°   H6                                        
H7      -59.1°   49.1°  140.1°   94.3°  -65.6°  147.9°   H7                                 
H8     -130.5°   50.8°   61.9°   92.9° -141.7°   90.9°   78.2°   H8                          
H9     -158.2°  -72.3°   30.8°   95.3° -163.1°   66.8°  109.7°  -31.9°   H9                   
H10     -54.8° -101.5°  129.1° -112.3°  -24.2°  113.5°  -86.9° -151.7°  146.9°   H10           
H11     -89.8°  163.4°   65.9°  -62.6°  -95.0°   32.1° -147.4°  122.9°   95.9°   81.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3h1hc1 :    (SER29)  (PRO259)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d1ntkc2 :    (SER28)  (PRO258)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d1l0lc2 :    (ASP58)  (ASP252)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d1pp9c2 :    (SER35)  (ASP252)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d1bccc3 :    (SER29)  (ASP253)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, N-terminal domain |Chicken (Gallus gallus) [TaxId: 9031]
 d2a06p1 :    (ASP58)  (ASP252)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  f.21