Protein Concepts Dictionary

Tableau information

Concept source:  d4g71a_  amino acid (a.a.) range (LYS19)(ILE250)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS19)   (GLY35) H1
	   (GLY39)   (ASN48) H2
	   (TYR52)   (LEU58) H3
	   (SER64)   (ASN98) H4
	  (MET103)  (ASN127) H5
	  (ASN127)  (LEU132) H6
	  (TRP143)  (SER155) H7
	  (THR156)  (ASN174) H8
	  (LEU181)  (GLY214) H9
	  (GLU217)  (LEU222) E10
	  (LEU222)  (ILE250) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2       31.4°   H2                                                                    
H3     -132.0° -159.7°   H3                                                             
H4     -159.0° -132.7°   66.5°   H4                                                      
H5       15.7°   44.6° -117.1° -173.7°   H5                                               
H6      -92.3°  -62.9°  135.7°   69.8° -107.1°   H6                                        
H7     -141.1° -117.3°   82.7°   17.9° -156.4°  -55.4°   H7                                 
H8     -148.0° -120.5°   78.6°   12.2° -163.7°  -57.6°   10.0°   H8                          
H9       54.8°   72.2°  -87.6° -145.4°   40.8°  127.6° -161.6° -151.6°   H9                   
E10     -88.5°  -63.4°  136.8°   71.3° -104.2°   16.1°   54.3°   59.6°  134.6°   E10           
H11    -119.1° -116.4°   81.0°   47.0° -127.3°  -74.8°   38.6°   47.5° -154.1°  -63.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4g7qa_ :    (LYS19)  (ILE250)   [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
 d4gp4a_ :    (VAL26)  (ILE250)   [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
 d4g71a_ :    (LYS19)  (ILE250)   [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
 d4g70a_ :    (VAL26)  (GLY256)   [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  f.24