Protein Concepts Dictionary

Tableau information

Concept source:  d2yooa_  amino acid (a.a.) range (PRO135)(ASP314)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO135)  (GLY146) H1
	  (ASP153)  (SER168) H2
	  (GLU172)  (ALA198) H3
	  (LEU204)  (ASN210) H4
	  (SER219)  (ASP235) H5
	  (THR238)  (ARG253) H6
	  (ARG253)  (ASP262) H7
	  (LEU266)  (TRP276) H8
	  (MET283)  (ALA289) E9
	  (GLU302)  (PHE308) E10
	  (PHE308)  (ASP314) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      114.2°   H2                                                                    
H3      -35.8° -141.6°   H3                                                             
H4      -46.6°   68.7°  -81.1°   H4                                                      
H5      147.1°  -90.7°  111.7°  156.4°   H5                                               
H6      151.7°  -81.0°  118.3°  146.5°  -10.1°   H6                                        
H7       49.9°  148.5°   14.1°   94.8°  -97.6° -104.5°   H7                                 
H8      -96.8°  -44.6° -131.8°  -56.8°  116.1°  110.0° -145.4°   H8                          
E9       66.1°   49.1°  -93.8°   27.5° -129.1° -119.4°  104.7°  -60.1°   E9                   
E10     115.5° -121.6°   79.7°  156.8°  -32.8°  -41.5°   65.6° -145.9°  142.2°   E10           
H11     121.5°  -79.7°   98.0°  122.0°  -39.2°  -34.5°   87.8° -122.8°   96.2°  -48.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4tria_ :   (PRO135)  (ASP314)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4apya_ :   (GLU156)  (ASP330)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 1772]
 d4uaxa_ :   (PHE128)  (ASP314)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d1izoa_ :   (PHE135)  (TRP328)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome p450 152a1 (Bs-beta) |Bacillus subtilis [TaxId: 1423]
 d2yood_ :   (PRO135)  (ASP314)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d2yoob_ :   (PRO135)  (ASP314)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4trib_ :   (PRO135)  (ASP314)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d2yooa_ :   (PRO135)  (ASP314)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.104