Protein Concepts Dictionary

Tableau information

Concept source:  d4dnqa_  amino acid (a.a.) range (GLU136)(SER265)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU136)  (GLU148) H1
	  (TYR151)  (GLY157) H2
	  (PHE158)  (GLY164) H3
	  (PRO168)  (ASN180) H4
	  (ARG182)  (SER196) H5
	  (MET198)  (LEU204) H6
	  (PRO208)  (THR214) E7
	  (SER223)  (ASN230) H8
	  (LYS235)  (TRP240) E9
	  (PRO248)  (PRO253) H10
	  (PRO253)  (SER265) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2     -126.8°   H2                                                                    
H3     -133.9°   24.3°   H3                                                             
H4      -71.8°  150.7°  126.5°   H4                                                      
H5     -171.5°   53.6°   42.1°  104.4°   H5                                               
H6      108.0°  -50.3°  -32.2°  105.4°  -65.2°   H6                                        
E7       72.1°   94.3°  118.4° -114.1° -116.3° -137.5°   E7                                 
H8     -111.2°  -85.2°  -61.0°   65.9°   60.4°  -44.1° -176.1°   H8                          
E9       68.6°   87.8°  112.1° -121.4° -119.3°  126.9°  -11.7° -170.9°   E9                   
H10      79.2°  -48.0°  -64.0°  144.8° -101.5°  -65.1°   73.6° -108.7°   62.2°   H10           
H11    -125.6°   71.8°   47.7°  -78.9°   45.9°  -39.3°  161.8°  -15.7°  159.5° -103.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4hrxa_ :   (GLN136)  (ASP267)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4dnpa_ :   (GLN137)  (SER265)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Petunia hybrida [TaxId: 4102]
 d4ih1a_ :   (GLN136)  (ILE264)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3w06a_ :   (GLN136)  (ILE264)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4dnqc_ :   (GLU136)  (SER265)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Petunia hybrida [TaxId: 4102]
 d1cqza2 :   (GLY389)  (GLN542)   [view usage] : c.69.1.11 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Epoxide hydrolase |Mammalian epoxide hydrolase, C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
 d4dnqi_ :   (GLU136)  (SER265)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Petunia hybrida [TaxId: 4102]
 d4dnqa_ :   (GLU136)  (SER265)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Petunia hybrida [TaxId: 4102]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69