Protein Concepts Dictionary

Tableau information

Concept source:  d1a88a_  amino acid (a.a.) range (LEU139)(LYS274)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU139)  (ALA151) H1
	  (ARG153)  (GLY167) H2
	  (GLN177)  (GLY190) H3
	  (ALA192)  (SER203) H4
	  (PHE207)  (ILE214) H5
	  (PRO217)  (GLY223) E6
	  (GLY223)  (PRO230) H7
	  (TYR231)  (LEU241) H8
	  (ALA245)  (GLU251) E9
	  (MET257)  (PRO262) H10
	  (ASN266)  (LYS274) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2     -136.9°   H2                                                                    
H3      -79.1°  136.2°   H3                                                             
H4      175.4°   38.6°  104.3°   H4                                                      
H5      106.7°  -48.7°  106.4°  -69.5°   H5                                               
E6       74.8°   98.2° -118.5° -105.9° -134.1°   E6                                        
H7      -71.0°  152.0°  -27.6° -113.4°  133.8°   91.0°   H7                                 
H8     -115.6°  -69.8°   71.5°   63.3°  -38.9° -167.7°   98.6°   H8                          
E9       70.6°  -91.1° -130.1° -108.8°  119.6°  -15.8°  103.4° -157.8°   E9                   
H10      82.5°  -54.5°  142.7°   93.0°  -49.2°   86.9°  153.0°  -88.0°   71.4°   H10           
H11    -113.3°   77.5°   62.7°   66.3°   47.5°  171.6°  -89.7°    8.9°  166.8°  -96.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4x00b_ :   (HIS150)  (ARG283)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4nmwa_ :   (PRO122)  (LEU256)   [view usage] : c.69.1.26 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Biotin biosynthesis protein BioH |automated matches |Salmonella enterica [TaxId: 99287]
 d1va4a_ :   (ARG151)  (LYS270)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |Arylesterase |Pseudomonas fluorescens [TaxId: 294]
 d4x00a_ :   (VAL153)  (ARG283)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4dgqa_ :   (LYS140)  (SER276)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d1a88a_ :   (LEU139)  (LYS274)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |Chloroperoxidase L |Streptomyces lividans [TaxId: 1916]
 d3t4ua_ :   (ARG151)  (LYS270)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2ocka_ :   (THR152)  (GLN274)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1a8sa_ :   (MET137)  (GLY273)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |Chloroperoxidase F |Pseudomonas fluorescens [TaxId: 294]
 d3hi4a_ :   (LEU137)  (LYS270)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d3heaa_ :   (LEU137)  (LYS270)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d3foba_ :   (ASP142)  (LYS277)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d1u2ed_ :  (THR3148) (ARG3283)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1u2ea_ :   (THR148)  (ARG283)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1zoia_ :   (LYS140)  (SER276)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |automated matches |Pseudomonas putida [TaxId: 303]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69