Protein Concepts Dictionary

Tableau information

Concept source:  d3ukvb_  amino acid (a.a.) range (GLU594)(GLU691)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHHHEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU594)  (PHE599) H1
	  (ASP601)  (LEU611) H2
	  (LYS613)  (LEU618) H3
	  (LEU618)  (ALA624) H4
	  (SER625)  (ILE635) H5
	  (ILE635)  (PHE640) E6
	  (ALA656)  (VAL660) E7
	  (GLY663)  (LYS669) E8
	  (LEU674)  (LYS679) E9
	  (GLY680)  (GLY684) E10
	  (SER685)  (GLU691) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      133.7°   H2                                                                    
H3      -87.4°  -80.3°   H3                                                             
H4      -14.2° -142.8°  -80.8°   H4                                                      
H5      131.3°   79.2°  139.3°  133.4°   H5                                               
E6      150.5°   38.4°  112.1° -163.8°  -40.8°   E6                                        
E7      107.4°   30.7°   93.3° -120.0°  -86.6°  -51.9°   E7                                 
E8     -115.7°  -97.3°  -61.9°  101.5°   86.4°   93.4° -127.8°   E8                          
E9       44.0°  102.1°  113.9°  -58.0° -104.7° -106.6°  -71.5°  159.1°   E9                   
E10     -93.9°  127.5°  -81.5°   80.5°   83.6°  110.2°  157.9°   31.9° -130.3°   E10           
H11     -46.9°  179.4°  -99.8°  -37.8°  100.3°  141.2° -149.8°   82.2°  -78.4°   52.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ukvb_ :   (GLU594)  (GLU691)   [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d3ukna_ :   (LYS570)  (LYS690)   [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d3ukvc_ :   (GLU594)  (GLU691)   [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d3ukva_ :   (GLU594)  (GLU691)   [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d3uknb_ :   (GLU594)  (GLU691)   [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.82