Protein Concepts Dictionary

Tableau information

Concept source:  d4fjsa_  amino acid (a.a.) range (GLU6)(ALA176)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHHEEHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU6)   (GLY20) H1
	   (LYS22)   (GLY40) H2
	   (VAL49)   (GLY59) H3
	   (PHE67)   (GLY73) E4
	   (SER76)   (ASP82) E5
	   (ALA85)  (GLN103) H6
	  (GLY105)  (ARG113) E7
	  (SER121)  (GLY131) H8
	  (ILE133)  (GLN139) E9
	  (PRO158)  (PRO164) E10
	  (LEU171)  (ALA176) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      139.2°   H2                                                                    
H3      -25.4°  160.2°   H3                                                             
E4      106.0°   73.1°   97.8°   E4                                                      
E5       58.6° -112.2°  -71.6°  162.5°   E5                                               
H6     -113.8°   86.3°  -94.4°  -30.4°  158.9°   H6                                        
E7       46.1° -109.2°   66.7°  141.0°  -22.0°  159.9°   E7                                 
H8     -122.6°   92.2°  -97.7°  -57.9°  135.8°  -28.1°  154.3°   H8                          
E9       42.2° -102.0°   67.1°  120.9°  -42.6°  146.1°  -20.6°  164.8°   E9                   
E10    -133.6°   85.2° -108.3°  -68.8°  127.2°  -41.2°  148.9°  -15.5°  169.2°   E10           
E11      45.8°  -94.9°   71.2°  109.4°  -54.4°  136.9°  -32.7°  162.8°  -12.2°  178.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4h8ab_ :     (SER4)  (ALA176)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 562]
 d4fjsb_ :     (SER4)  (ALA176)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 316385]
 d1xrha_ :     (SER6)  (ALA178)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]
 d2x06a_ :     (LYS4)  (ALA177)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase |Methanococcus jannaschii [TaxId: 2190]
 d1xrhg_ :     (SER6)  (ALA178)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]
 d4fjua_ :     (ARG5)  (ALA176)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 316385]
 d1xrhd_ :     (SER6)  (ALA178)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]
 d4fjsa_ :     (GLU6)  (ALA176)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 316385]
 d4fjub_ :     (SER4)  (ALA176)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |Escherichia coli [TaxId: 316385]
 d1xrhf_ :     (SER6)  (ALA178)   [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.122