Protein Concepts Dictionary

Tableau information

Concept source:  d1oxwa_  amino acid (a.a.) range (PRO44)(ALA189)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHEHHHHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO44)   (ASP59) H1
	   (ARG65)   (PHE70) H2
	   (ASP71)   (SER77) E3
	   (SER77)   (ILE86) H4
	   (ALA98)  (GLU108) H5
	  (HIS109)  (ASN115) H6
	  (GLY127)  (LYS137) H7
	  (GLU149)  (SER153) E8
	  (PRO162)  (LYS167) E9
	  (PRO174)  (ASP177) H10
	  (LYS179)  (ALA189) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2       82.3°   H2                                                                    
E3     -160.1°  117.4°   E3                                                             
H4      -27.6°  -99.1° -139.2°   H4                                                      
H5     -154.1° -123.4°   -8.6°  130.9°   H5                                               
H6      151.9°  -80.6°  -44.3°  136.4°  -46.3°   H6                                        
H7       13.6°  -80.8°  159.3°   20.1°  150.9° -139.6°   H7                                 
E8      175.1°   99.5°  -17.9° -154.6°  -25.1°  -32.8° -171.1°   E8                          
E9      -21.9° -101.3°  140.6°   11.1°  133.1°  147.3°   20.7°  158.3°   E9                   
H10    -106.6°  168.1°   53.5°  -92.1°   48.7°   94.0° -109.7°   71.1°  -89.0°   H10           
H11     134.3°   81.9°  -52.4° -159.2°  -60.8°  -64.4°  146.1°   42.1° -148.2°   86.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1oxwc_ :  (GLY2038) (ALA2189)   [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
 d4pkba_ :    (PRO44)  (ALA189)   [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
 d1oxwb_ :  (GLY1038) (ALA1189)   [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
 d1oxwa_ :    (PRO44)  (ALA189)   [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
 d4pk9a_ :    (PRO44)  (ALA189)   [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.19