Protein Concepts Dictionary

Tableau information

Concept source:  d1ocba_  amino acid (a.a.) range (PRO238)(ASN373)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHEHHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO238)  (ALA244) H1
	  (ALA244)  (ASP259) H2
	  (HIS262)  (MET267) E3
	  (HIS271)  (TRP277) H4
	  (ILE281)  (GLY296) H5
	  (GLY303)  (ASN307) E6
	  (ASN326)  (GLU331) H7
	  (GLU331)  (ALA337) H8
	  (PRO340)  (GLY346) H9
	  (GLY346)  (GLY356) E10
	  (GLU367)  (ASN373) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2       49.4°   H2                                                                    
E3     -135.9° -163.0°   E3                                                             
H4      -75.3° -117.0°   61.3°   H4                                                      
H5       29.3°  -50.9°  143.8°   95.6°   H5                                               
E6      169.7°  124.0°  -53.1°  114.3°  141.3°   E6                                        
H7       67.9°   34.3° -154.2°  143.2°   49.9° -102.3°   H7                                 
H8      -39.4°  -85.9°   96.6°   36.2°  -60.7°  149.5° -107.0°   H8                          
H9      -27.2°  -75.7°  113.3°   59.4°  -36.2°  154.4°  -85.8°  -26.6°   H9                   
E10     138.6°   95.3°  -84.5° -145.8°  114.5°  -31.6°  -70.8°  172.4°  146.9°   E10           
H11      81.6°   62.0° -130.4° -144.2°  -54.4°   88.2°   28.3° -114.2°  -88.0°   60.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ocba_ :   (PRO238)  (ASN373)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]
 d1qjwa_ :   (SER222)  (ASN369)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Trichoderma reesei, Cel6a [TaxId: 51453]
 d4i5ua_ :   (THR233)  (ASN369)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |automated matches |Fungus (Humicola insolens) [TaxId: 34413]
 d1qk0a_ :   (THR232)  (ASN369)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Trichoderma reesei, Cel6a [TaxId: 51453]
 d3voia_ :   (ALA222)  (ASN356)   [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
 d1oc5a_ :   (VAL237)  (GLN361)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]
 d1cb2a_ :   (VAL227)  (ASN369)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Trichoderma reesei, Cel6a [TaxId: 51453]
 d1hgwa_ :   (THR232)  (ASN369)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Trichoderma reesei, Cel6a [TaxId: 51453]
 d1bvwa_ :   (VAL237)  (ASN373)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.6