Protein Concepts Dictionary

Tableau information

Concept source:  d1oxxk2  amino acid (a.a.) range (SER113)(GLY242)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHEHHEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER113)  (ASP129) H1
	  (SER142)  (LEU155) H2
	  (SER160)  (GLU166) E3
	  (GLU166)  (ASP172) H4
	  (ARG176)  (GLY191) H5
	  (THR193)  (SER198) E6
	  (PRO201)  (ILE207) H7
	  (ARG210)  (LYS216) E8
	  (VAL220)  (LYS224) E9
	  (LYS224)  (ASP230) H10
	  (SER234)  (GLY242) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      133.3°   H2                                                                    
E3      -56.4°  144.7°   E3                                                             
H4      -67.2°  156.9°   50.6°   H4                                                      
H5      125.4°  -21.9° -165.6°  143.6°   H5                                               
E6      -59.8°  140.5°   -4.4°  -53.7° -161.9°   E6                                        
H7       99.7°  -58.5°  153.9°  113.7°  -36.7°  158.1°   H7                                 
E8      -95.5°   98.1°  -48.1°  -88.7°  119.9°  -43.7°  156.5°   E8                          
E9       74.9° -101.2°  113.6°   71.5°  -79.3°  118.0°  -43.3°  160.1°   E9                   
H10     -48.5°  118.9°  -34.7°  -82.1°  133.2°  -33.8° -137.8°  -48.6°  123.3°   H10           
H11     -93.0° -116.7°   93.3°   42.9° -100.7°   96.1°  -76.2°  121.0°  -44.2° -124.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3d31a2 :   (PRO105)  (VAL228)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Sulfate/molybdate ABC transporter, ATP-binding protein |Methanosarcina acetivorans [TaxId: 2214]
 d2zu0c_ :   (PRO134)  (GLU246)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1oxxk2 :   (SER113)  (GLY242)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Glucose transport protein GlcV, N-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
 d1q12a2 :   (LYS106)  (PHE233)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Maltose transport protein MalK, N-terminal domain |Escherichia coli [TaxId: 562]
 d2olja_ :   (TYR133)  (LEU236)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d2oukb_ :   (TYR133)  (SER237)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d1oxsc2 :   (SER113)  (GLY242)   [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Glucose transport protein GlcV, N-terminal domain |Sulfolobus solfataricus [TaxId: 2287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37