Protein Concepts Dictionary

Tableau information

Concept source:  d4kwta1  amino acid (a.a.) range (LYS12)(HIS149)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS12)   (SER17) H1
	   (SER17)   (ALA37) H2
	   (ASN48)   (GLU54) E3
	   (ARG59)   (GLY72) H4
	   (ALA73)   (GLY79) E5
	   (GLN84)   (GLU89) H6
	   (SER90)  (MET101) H7
	  (ASP103)  (GLY109) E8
	  (GLY111)  (PHE121) H9
	  (VAL124)  (LEU130) E10
	  (PRO136)  (HIS149) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                           
H2      101.3°   H2                                                                    
E3      135.7° -113.0°   E3                                                             
H4       44.1°   67.7°  179.1°   H4                                                      
E5      148.8° -109.0°  -19.9° -159.8°   E5                                               
H6       95.0°  106.3°  101.1°  -78.2°   84.0°   H6                                        
H7      -59.4°   43.0°  153.0°  -27.9°  151.7°   98.8°   H7                                 
E8     -133.3° -107.0°  -10.3°  170.5°  -28.4° -111.3°  143.9°   E8                          
H9      -51.1°   79.7°  158.7°  -20.5°  141.6°   58.0°  -46.3°  169.0°   H9                   
E10    -125.7°  -87.7°  -35.3°  145.6°  -50.0° -133.8°  119.2°  -25.1°  165.5°   E10           
H11     -61.0°  -69.2° -105.5°   75.2° -123.3°  152.6°  -58.7°  -95.6°  -95.0°  -73.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3mpua1 :    (SER11)  (THR148)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3tpfb1 :     (THR6)  (ASN139)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d3tpfa1 :     (THR6)  (ASN139)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d1acma1 :    (SER11)  (GLY150)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d1vlva1 :    (THR12)  (ASN149)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Thermotoga maritima [TaxId: 2336]
 d4jqoa1 :    (LYS12)  (HIS149)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
 d4jfrb1 :    (LYS12)  (HIS149)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
 d4f2ga1 :    (GLN11)  (HIS148)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d4kwta1 :    (LYS12)  (HIS149)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.78